RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
SMARCAL1-202ENST00000358207 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
SMARCAL1-202ENST00000358207 KRTAP4-8A0A0G2JLE6 195 aa3.42□□□□□ -1.86
SMARCAL1-202ENST00000358207 KRTAP4-8Q9BYQ9 185 aa3.42□□□□□ -1.86
SMARCAL1-202ENST00000358207 MUC12Q9UKN1 5478 aa3.38□□□□□ -1.87
SMARCAL1-202ENST00000358207 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
SMARCAL1-202ENST00000358207 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
SMARCAL1-202ENST00000358207 LCE1AQ5T7P2 110 aa3.36□□□□□ -1.87
SMARCAL1-202ENST00000358207 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
SMARCAL1-202ENST00000358207 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
SMARCAL1-202ENST00000358207 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
SMARCAL1-202ENST00000358207 SPRR2EP22531 72 aa3.26□□□□□ -1.89
SMARCAL1-202ENST00000358207 SPRR2BP35325 72 aa3.26□□□□□ -1.89
SMARCAL1-202ENST00000358207 SPRR2AP35326 72 aa3.26□□□□□ -1.89
SMARCAL1-202ENST00000358207 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
SMARCAL1-202ENST00000358207 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
SMARCAL1-202ENST00000358207 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
SMARCAL1-202ENST00000358207 SPRR2DP22532 72 aa3.17□□□□□ -1.9
SMARCAL1-202ENST00000358207 KRTAP4-7Q9BYR0 210 aa3.16□□□□□ -1.9
SMARCAL1-202ENST00000358207 KRTAP19-7Q3SYF9 63 aa3.14□□□□□ -1.91
SMARCAL1-202ENST00000358207 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
SMARCAL1-202ENST00000358207 LCE3BQ5TA77 95 aa3.12□□□□□ -1.91
SMARCAL1-202ENST00000358207 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
SMARCAL1-202ENST00000358207 MT1EP04732 61 aa3.06□□□□□ -1.92
SMARCAL1-202ENST00000358207 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
SMARCAL1-202ENST00000358207 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
SMARCAL1-202ENST00000358207 MT1LQ93083 61 aa3.01□□□□□ -1.93
SMARCAL1-202ENST00000358207 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
SMARCAL1-202ENST00000358207 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
SMARCAL1-202ENST00000358207 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
SMARCAL1-202ENST00000358207 LOC100996750A0A140TA64 210 aa2.96□□□□□ -1.94
SMARCAL1-202ENST00000358207 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
SMARCAL1-202ENST00000358207 MT1GP13640 62 aa2.94□□□□□ -1.94
SMARCAL1-202ENST00000358207 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
SMARCAL1-202ENST00000358207 MT1MQ8N339 61 aa2.89□□□□□ -1.95
SMARCAL1-202ENST00000358207 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
SMARCAL1-202ENST00000358207 PRM1P04553 51 aa2.86□□□□□ -1.95
SMARCAL1-202ENST00000358207 LCE1DQ5T752 114 aa2.84□□□□□ -1.95
SMARCAL1-202ENST00000358207 KRTAP19-4Q3LI73 84 aa2.84□□□□□ -1.95
SMARCAL1-202ENST00000358207 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.96
SMARCAL1-202ENST00000358207 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
SMARCAL1-202ENST00000358207 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
SMARCAL1-202ENST00000358207 KRTAP4-9Q9BYQ8 210 aa2.81□□□□□ -1.96
SMARCAL1-202ENST00000358207 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
SMARCAL1-202ENST00000358207 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.96
SMARCAL1-202ENST00000358207 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
SMARCAL1-202ENST00000358207 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
SMARCAL1-202ENST00000358207 MT4P47944 62 aa2.65□□□□□ -1.99
SMARCAL1-202ENST00000358207 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
SMARCAL1-202ENST00000358207 KRTAP4-6Q9BYQ5 205 aa2.65□□□□□ -1.99
SMARCAL1-202ENST00000358207 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
SMARCAL1-202ENST00000358207 KRTAP9-4Q9BYQ2 154 aa2.64□□□□□ -1.99
SMARCAL1-202ENST00000358207 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
SMARCAL1-202ENST00000358207 MT1AP04731 61 aa2.62□□□□□ -1.99
SMARCAL1-202ENST00000358207 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
SMARCAL1-202ENST00000358207 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
SMARCAL1-202ENST00000358207 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
SMARCAL1-202ENST00000358207 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
SMARCAL1-202ENST00000358207 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
SMARCAL1-202ENST00000358207 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
SMARCAL1-202ENST00000358207 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
SMARCAL1-202ENST00000358207 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
SMARCAL1-202ENST00000358207 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
SMARCAL1-202ENST00000358207 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
SMARCAL1-202ENST00000358207 MT3P25713 68 aa2.27□□□□□ -2.05
SMARCAL1-202ENST00000358207 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
SMARCAL1-202ENST00000358207 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
SMARCAL1-202ENST00000358207 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
SMARCAL1-202ENST00000358207 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
SMARCAL1-202ENST00000358207 KRTAP4-2Q9BYR5 136 aa2.02□□□□□ -2.09
SMARCAL1-202ENST00000358207 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
SMARCAL1-202ENST00000358207 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
SMARCAL1-202ENST00000358207 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
SMARCAL1-202ENST00000358207 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
SMARCAL1-202ENST00000358207 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
SMARCAL1-202ENST00000358207 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
SMARCAL1-202ENST00000358207 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 87.1 ms