RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
CD46-205ENST00000358170 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
CD46-205ENST00000358170 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
CD46-205ENST00000358170 SSPOA2VEC9 5147 aa2.98□□□□□ -1.93
CD46-205ENST00000358170 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
CD46-205ENST00000358170 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
CD46-205ENST00000358170 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
CD46-205ENST00000358170 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
CD46-205ENST00000358170 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
CD46-205ENST00000358170 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
CD46-205ENST00000358170 CRCT1Q9UGL9 99 aa2.89□□□□□ -1.95
CD46-205ENST00000358170 INE1O15225 51 aa2.86□□□□□ -1.95
CD46-205ENST00000358170 MT1LQ93083 61 aa2.84□□□□□ -1.95
CD46-205ENST00000358170 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.95
CD46-205ENST00000358170 MT1EP04732 61 aa2.84□□□□□ -1.96
CD46-205ENST00000358170 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
CD46-205ENST00000358170 MT1GP13640 62 aa2.78□□□□□ -1.96
CD46-205ENST00000358170 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
CD46-205ENST00000358170 KRTAP19-6Q3LI70 58 aa2.74□□□□□ -1.97
CD46-205ENST00000358170 MACF1Q9UPN3 7388 aaKnown RBP2.72□□□□□ -1.97
CD46-205ENST00000358170 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
CD46-205ENST00000358170 SYNE2Q8WXH0 6885 aaKnown RBP2.71□□□□□ -1.98
CD46-205ENST00000358170 KRTAP2-3P0C7H8 128 aa2.7□□□□□ -1.98
CD46-205ENST00000358170 KRTAP2-4Q9BYR9 128 aa2.7□□□□□ -1.98
CD46-205ENST00000358170 KRTAP2-1Q9BYU5 128 aa2.7□□□□□ -1.98
CD46-205ENST00000358170 MT1MQ8N339 61 aa2.67□□□□□ -1.98
CD46-205ENST00000358170 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
CD46-205ENST00000358170 MDN1Q9NU22 5596 aa2.62□□□□□ -1.99
CD46-205ENST00000358170 KRTAP19-4Q3LI73 84 aa2.59□□□□□ -1.99
CD46-205ENST00000358170 LCE5AQ5TCM9 118 aa2.58□□□□□ -2
CD46-205ENST00000358170 KRTAP12-4P60329 112 aa2.56□□□□□ -2
CD46-205ENST00000358170 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
CD46-205ENST00000358170 SPRR2EP22531 72 aa2.44□□□□□ -2.02
CD46-205ENST00000358170 SPRR2BP35325 72 aa2.44□□□□□ -2.02
CD46-205ENST00000358170 SPRR2AP35326 72 aa2.44□□□□□ -2.02
CD46-205ENST00000358170 LCE1AQ5T7P2 110 aa2.41□□□□□ -2.02
CD46-205ENST00000358170 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
CD46-205ENST00000358170 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
CD46-205ENST00000358170 MT1AP04731 61 aa2.35□□□□□ -2.03
CD46-205ENST00000358170 SPRR2DP22532 72 aa2.32□□□□□ -2.04
CD46-205ENST00000358170 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
CD46-205ENST00000358170 KRTAP9-7A8MTY7 169 aa2.3□□□□□ -2.04
CD46-205ENST00000358170 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
CD46-205ENST00000358170 PRM1P04553 51 aa2.26□□□□□ -2.05
CD46-205ENST00000358170 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
CD46-205ENST00000358170 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
CD46-205ENST00000358170 LCE4AQ5TA78 99 aa2.23□□□□□ -2.05
CD46-205ENST00000358170 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
CD46-205ENST00000358170 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
CD46-205ENST00000358170 MT3P25713 68 aa2.15□□□□□ -2.06
CD46-205ENST00000358170 MT4P47944 62 aa2.15□□□□□ -2.07
CD46-205ENST00000358170 NEBP20929 6669 aa2.15□□□□□ -2.07
CD46-205ENST00000358170 KRTAP5-4Q6L8H1 288 aa2□□□□□ -2.09
CD46-205ENST00000358170 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
CD46-205ENST00000358170 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
CD46-205ENST00000358170 KRTAP2-2Q9BYT5 123 aa1.92□□□□□ -2.1
CD46-205ENST00000358170 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
CD46-205ENST00000358170 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
CD46-205ENST00000358170 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
CD46-205ENST00000358170 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
CD46-205ENST00000358170 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
CD46-205ENST00000358170 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
CD46-205ENST00000358170 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
CD46-205ENST00000358170 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
CD46-205ENST00000358170 LCE1EQ5T753 118 aa1.75□□□□□ -2.13
CD46-205ENST00000358170 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.14
CD46-205ENST00000358170 GPR98Q8WXG9 6306 aa1.61□□□□□ -2.15
CD46-205ENST00000358170 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
CD46-205ENST00000358170 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
CD46-205ENST00000358170 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
CD46-205ENST00000358170 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
CD46-205ENST00000358170 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
CD46-205ENST00000358170 KRTAP5-7Q6L8G8 165 aa1.34□□□□□ -2.19
CD46-205ENST00000358170 LCE1FQ5T754 118 aa1.34□□□□□ -2.2
CD46-205ENST00000358170 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
CD46-205ENST00000358170 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
CD46-205ENST00000358170 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 14.6 ms