RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
PSEN1-202ENST00000357710 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
PSEN1-202ENST00000357710 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.9□□□□□ -1.79
PSEN1-202ENST00000357710 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
PSEN1-202ENST00000357710 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
PSEN1-202ENST00000357710 KRTAP4-8Q9BYQ9 185 aa3.85□□□□□ -1.79
PSEN1-202ENST00000357710 KMT2DO14686 5537 aa3.84□□□□□ -1.79
PSEN1-202ENST00000357710 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.8
PSEN1-202ENST00000357710 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
PSEN1-202ENST00000357710 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
PSEN1-202ENST00000357710 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
PSEN1-202ENST00000357710 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
PSEN1-202ENST00000357710 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
PSEN1-202ENST00000357710 KRTAP19-5Q3LI72 72 aa3.78□□□□□ -1.8
PSEN1-202ENST00000357710 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
PSEN1-202ENST00000357710 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
PSEN1-202ENST00000357710 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
PSEN1-202ENST00000357710 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
PSEN1-202ENST00000357710 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
PSEN1-202ENST00000357710 MT1EP04732 61 aa3.57□□□□□ -1.84
PSEN1-202ENST00000357710 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
PSEN1-202ENST00000357710 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
PSEN1-202ENST00000357710 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
PSEN1-202ENST00000357710 MT1LQ93083 61 aa3.5□□□□□ -1.85
PSEN1-202ENST00000357710 PRM1P04553 51 aa3.47□□□□□ -1.85
PSEN1-202ENST00000357710 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
PSEN1-202ENST00000357710 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
PSEN1-202ENST00000357710 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
PSEN1-202ENST00000357710 KRTAP4-7Q9BYR0 210 aa3.43□□□□□ -1.86
PSEN1-202ENST00000357710 MT1GP13640 62 aa3.41□□□□□ -1.86
PSEN1-202ENST00000357710 MT1AP04731 61 aa3.39□□□□□ -1.87
PSEN1-202ENST00000357710 SPRR2EP22531 72 aa3.37□□□□□ -1.87
PSEN1-202ENST00000357710 SPRR2BP35325 72 aa3.37□□□□□ -1.87
PSEN1-202ENST00000357710 SPRR2AP35326 72 aa3.37□□□□□ -1.87
PSEN1-202ENST00000357710 MT1MQ8N339 61 aa3.37□□□□□ -1.87
PSEN1-202ENST00000357710 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
PSEN1-202ENST00000357710 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
PSEN1-202ENST00000357710 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
PSEN1-202ENST00000357710 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
PSEN1-202ENST00000357710 NEBP20929 6669 aa3.3□□□□□ -1.88
PSEN1-202ENST00000357710 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
PSEN1-202ENST00000357710 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
PSEN1-202ENST00000357710 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
PSEN1-202ENST00000357710 SPRR2DP22532 72 aa3.25□□□□□ -1.89
PSEN1-202ENST00000357710 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
PSEN1-202ENST00000357710 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
PSEN1-202ENST00000357710 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
PSEN1-202ENST00000357710 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
PSEN1-202ENST00000357710 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
PSEN1-202ENST00000357710 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
PSEN1-202ENST00000357710 MT3P25713 68 aa3□□□□□ -1.93
PSEN1-202ENST00000357710 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
PSEN1-202ENST00000357710 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
PSEN1-202ENST00000357710 MT4P47944 62 aa2.81□□□□□ -1.96
PSEN1-202ENST00000357710 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.96
PSEN1-202ENST00000357710 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
PSEN1-202ENST00000357710 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
PSEN1-202ENST00000357710 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
PSEN1-202ENST00000357710 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
PSEN1-202ENST00000357710 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
PSEN1-202ENST00000357710 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
PSEN1-202ENST00000357710 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
PSEN1-202ENST00000357710 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
PSEN1-202ENST00000357710 LCE1CQ5T751 118 aa2.34□□□□□ -2.04
PSEN1-202ENST00000357710 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.04
PSEN1-202ENST00000357710 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
PSEN1-202ENST00000357710 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
PSEN1-202ENST00000357710 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
PSEN1-202ENST00000357710 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
PSEN1-202ENST00000357710 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
PSEN1-202ENST00000357710 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
PSEN1-202ENST00000357710 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
PSEN1-202ENST00000357710 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
PSEN1-202ENST00000357710 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
PSEN1-202ENST00000357710 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
PSEN1-202ENST00000357710 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
PSEN1-202ENST00000357710 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms