RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 KRTAP19-3Q7Z4W3 81 aa6.34□□□□□ -1.39
NCL-202ENST00000356936 TNP1P09430 55 aa6.29□□□□□ -1.4
NCL-202ENST00000356936 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
NCL-202ENST00000356936 UQCR11O14957 56 aa6.25□□□□□ -1.41
NCL-202ENST00000356936 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
NCL-202ENST00000356936 MT1GP13640 62 aa6.21□□□□□ -1.42
NCL-202ENST00000356936 PP632Q6XCG6 107 aa6.21□□□□□ -1.42
NCL-202ENST00000356936 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
NCL-202ENST00000356936 MT1LQ93083 61 aa6.11□□□□□ -1.43
NCL-202ENST00000356936 DSTQ03001 7570 aaKnown RBP6.11□□□□□ -1.43
NCL-202ENST00000356936 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.43
NCL-202ENST00000356936 V9GYY9 64 aa6.08□□□□□ -1.44
NCL-202ENST00000356936 MT1MQ8N339 61 aa6.07□□□□□ -1.44
NCL-202ENST00000356936 H3BS24 57 aa6.05□□□□□ -1.44
NCL-202ENST00000356936 K7ERS5 55 aa6.04□□□□□ -1.44
NCL-202ENST00000356936 PCP4P48539 62 aa6.03□□□□□ -1.44
NCL-202ENST00000356936 Q1T7F1 81 aa5.99□□□□□ -1.45
NCL-202ENST00000356936 PSPHP1O15172 72 aa5.98□□□□□ -1.45
NCL-202ENST00000356936 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
NCL-202ENST00000356936 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
NCL-202ENST00000356936 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
NCL-202ENST00000356936 KRTAP4-3Q9BYR4 195 aa5.88□□□□□ -1.47
NCL-202ENST00000356936 A6NED7 52 aa5.81□□□□□ -1.48
NCL-202ENST00000356936 MT4P47944 62 aa5.78□□□□□ -1.48
NCL-202ENST00000356936 KRTAP5-4Q6L8H1 288 aa5.77□□□□□ -1.49
NCL-202ENST00000356936 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
NCL-202ENST00000356936 RPS28P62857 69 aaKnown RBP5.71□□□□□ -1.5
NCL-202ENST00000356936 CDC42SE1Q9NRR8 79 aa5.69□□□□□ -1.5
NCL-202ENST00000356936 HMCN1Q96RW7 5635 aa5.66□□□□□ -1.5
NCL-202ENST00000356936 GPR98Q8WXG9 6306 aa5.65□□□□□ -1.5
NCL-202ENST00000356936 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
NCL-202ENST00000356936 ROMO1P60602 79 aa5.57□□□□□ -1.52
NCL-202ENST00000356936 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
NCL-202ENST00000356936 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
NCL-202ENST00000356936 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
NCL-202ENST00000356936 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
NCL-202ENST00000356936 KRTAP20-2Q3LI61 65 aa5.44□□□□□ -1.54
NCL-202ENST00000356936 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
NCL-202ENST00000356936 KRTAP5-10Q6L8G5 202 aa5.39□□□□□ -1.55
NCL-202ENST00000356936 AHNAK2Q8IVF2 5795 aa5.38□□□□□ -1.55
NCL-202ENST00000356936 MT1AP04731 61 aa5.21□□□□□ -1.58
NCL-202ENST00000356936 KRTAP5-7Q6L8G8 165 aa5.2□□□□□ -1.58
NCL-202ENST00000356936 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
NCL-202ENST00000356936 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
NCL-202ENST00000356936 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
NCL-202ENST00000356936 KRTAP5-2Q701N4 177 aa5.05□□□□□ -1.6
NCL-202ENST00000356936 BRK1Q8WUW1 75 aa5□□□□□ -1.61
NCL-202ENST00000356936 KRTAP6-2Q3LI66 62 aa4.93□□□□□ -1.62
NCL-202ENST00000356936 PRO0628Q9UI54 55 aa4.86□□□□□ -1.63
NCL-202ENST00000356936 MT3P25713 68 aa4.8□□□□□ -1.64
NCL-202ENST00000356936 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
NCL-202ENST00000356936 PMAIP1Q13794 54 aa4.72□□□□□ -1.65
NCL-202ENST00000356936 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
NCL-202ENST00000356936 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
NCL-202ENST00000356936 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
NCL-202ENST00000356936 PRAC1Q96KF2 57 aa4.48□□□□□ -1.69
NCL-202ENST00000356936 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
NCL-202ENST00000356936 MUC5ACP98088 5654 aa4.46□□□□□ -1.7
NCL-202ENST00000356936 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
NCL-202ENST00000356936 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
NCL-202ENST00000356936 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
NCL-202ENST00000356936 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
NCL-202ENST00000356936 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
NCL-202ENST00000356936 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
NCL-202ENST00000356936 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
NCL-202ENST00000356936 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
NCL-202ENST00000356936 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
NCL-202ENST00000356936 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
NCL-202ENST00000356936 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
NCL-202ENST00000356936 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
NCL-202ENST00000356936 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
NCL-202ENST00000356936 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
NCL-202ENST00000356936 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
NCL-202ENST00000356936 INE1O15225 51 aa2.92□□□□□ -1.94
NCL-202ENST00000356936 PRM1P04553 51 aa2.82□□□□□ -1.96
NCL-202ENST00000356936 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
NCL-202ENST00000356936 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
NCL-202ENST00000356936 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms