RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
CAPN3-204ENST00000356316 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
CAPN3-204ENST00000356316 SMIM26A0A096LP01 95 aa3.84□□□□□ -1.79
CAPN3-204ENST00000356316 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
CAPN3-204ENST00000356316 COX7CP15954 63 aa3.83□□□□□ -1.8
CAPN3-204ENST00000356316 A0A1B0GU69 56 aa3.82□□□□□ -1.8
CAPN3-204ENST00000356316 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
CAPN3-204ENST00000356316 H7BZZ5 65 aa3.78□□□□□ -1.8
CAPN3-204ENST00000356316 TNP1P09430 55 aa3.78□□□□□ -1.8
CAPN3-204ENST00000356316 MT4P47944 62 aa3.78□□□□□ -1.8
CAPN3-204ENST00000356316 MT1MQ8N339 61 aa3.78□□□□□ -1.8
CAPN3-204ENST00000356316 MT1LQ93083 61 aa3.76□□□□□ -1.81
CAPN3-204ENST00000356316 A8MU10 97 aa3.75□□□□□ -1.81
CAPN3-204ENST00000356316 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
CAPN3-204ENST00000356316 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
CAPN3-204ENST00000356316 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
CAPN3-204ENST00000356316 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
CAPN3-204ENST00000356316 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
CAPN3-204ENST00000356316 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
CAPN3-204ENST00000356316 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
CAPN3-204ENST00000356316 ANAPC13Q9BS18 74 aa3.65□□□□□ -1.83
CAPN3-204ENST00000356316 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
CAPN3-204ENST00000356316 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
CAPN3-204ENST00000356316 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
CAPN3-204ENST00000356316 ATP5EP56381 51 aaPredicted RBP3.58□□□□□ -1.84
CAPN3-204ENST00000356316 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
CAPN3-204ENST00000356316 LINC01558Q9Y6Z2 57 aa3.55□□□□□ -1.84
CAPN3-204ENST00000356316 UQCR11O14957 56 aa3.54□□□□□ -1.84
CAPN3-204ENST00000356316 CCDC179H3BU77 68 aa3.53□□□□□ -1.84
CAPN3-204ENST00000356316 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
CAPN3-204ENST00000356316 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
CAPN3-204ENST00000356316 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
CAPN3-204ENST00000356316 KRTAP25-1Q3LHN0 102 aa3.48□□□□□ -1.85
CAPN3-204ENST00000356316 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
CAPN3-204ENST00000356316 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
CAPN3-204ENST00000356316 K7ERS5 55 aa3.46□□□□□ -1.86
CAPN3-204ENST00000356316 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
CAPN3-204ENST00000356316 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
CAPN3-204ENST00000356316 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
CAPN3-204ENST00000356316 TMEM258P61165 79 aa3.42□□□□□ -1.86
CAPN3-204ENST00000356316 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
CAPN3-204ENST00000356316 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
CAPN3-204ENST00000356316 RPS28P62857 69 aaKnown RBP3.39□□□□□ -1.87
CAPN3-204ENST00000356316 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
CAPN3-204ENST00000356316 V9GYY9 64 aa3.32□□□□□ -1.88
CAPN3-204ENST00000356316 PSPHP1O15172 72 aa3.3□□□□□ -1.88
CAPN3-204ENST00000356316 Q1T7F1 81 aa3.24□□□□□ -1.89
CAPN3-204ENST00000356316 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
CAPN3-204ENST00000356316 CDC42SE1Q9NRR8 79 aa3.22□□□□□ -1.89
CAPN3-204ENST00000356316 MT1AP04731 61 aa3.21□□□□□ -1.9
CAPN3-204ENST00000356316 A6NED7 52 aa3.2□□□□□ -1.9
CAPN3-204ENST00000356316 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
CAPN3-204ENST00000356316 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
CAPN3-204ENST00000356316 ROMO1P60602 79 aa3.15□□□□□ -1.91
CAPN3-204ENST00000356316 PRO0628Q9UI54 55 aa3.12□□□□□ -1.91
CAPN3-204ENST00000356316 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
CAPN3-204ENST00000356316 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
CAPN3-204ENST00000356316 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
CAPN3-204ENST00000356316 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
CAPN3-204ENST00000356316 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
CAPN3-204ENST00000356316 BRK1Q8WUW1 75 aa3.04□□□□□ -1.92
CAPN3-204ENST00000356316 MUC5ACP98088 5654 aa3□□□□□ -1.93
CAPN3-204ENST00000356316 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
CAPN3-204ENST00000356316 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
CAPN3-204ENST00000356316 PMAIP1Q13794 54 aa2.92□□□□□ -1.94
CAPN3-204ENST00000356316 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
CAPN3-204ENST00000356316 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
CAPN3-204ENST00000356316 LCE1CQ5T751 118 aa2.54□□□□□ -2
CAPN3-204ENST00000356316 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
CAPN3-204ENST00000356316 LUZP6Q538Z0 58 aa2.23□□□□□ -2.05
CAPN3-204ENST00000356316 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
CAPN3-204ENST00000356316 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
CAPN3-204ENST00000356316 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
CAPN3-204ENST00000356316 INE1O15225 51 aa1.94□□□□□ -2.1
CAPN3-204ENST00000356316 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
CAPN3-204ENST00000356316 PRM1P04553 51 aa1.59□□□□□ -2.15
CAPN3-204ENST00000356316 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 62.9 ms