RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
HOXA1-202ENST00000355633 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
HOXA1-202ENST00000355633 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
HOXA1-202ENST00000355633 KMT2DO14686 5537 aa5.17□□□□□ -1.58
HOXA1-202ENST00000355633 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
HOXA1-202ENST00000355633 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
HOXA1-202ENST00000355633 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
HOXA1-202ENST00000355633 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
HOXA1-202ENST00000355633 INE1O15225 51 aa5.02□□□□□ -1.61
HOXA1-202ENST00000355633 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
HOXA1-202ENST00000355633 MT1EP04732 61 aa4.96□□□□□ -1.62
HOXA1-202ENST00000355633 SPRR2FQ96RM1 72 aa4.91□□□□□ -1.62
HOXA1-202ENST00000355633 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
HOXA1-202ENST00000355633 MT1LQ93083 61 aa4.85□□□□□ -1.63
HOXA1-202ENST00000355633 SYNE2Q8WXH0 6885 aaKnown RBP4.85□□□□□ -1.63
HOXA1-202ENST00000355633 KRTAP6-3Q3LI67 103 aa4.8□□□□□ -1.64
HOXA1-202ENST00000355633 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
HOXA1-202ENST00000355633 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
HOXA1-202ENST00000355633 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
HOXA1-202ENST00000355633 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
HOXA1-202ENST00000355633 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
HOXA1-202ENST00000355633 MT1GP13640 62 aa4.73□□□□□ -1.65
HOXA1-202ENST00000355633 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
HOXA1-202ENST00000355633 KRTAP9-7A8MTY7 169 aa4.68□□□□□ -1.66
HOXA1-202ENST00000355633 SPRR2EP22531 72 aa4.68□□□□□ -1.66
HOXA1-202ENST00000355633 SPRR2BP35325 72 aa4.68□□□□□ -1.66
HOXA1-202ENST00000355633 SPRR2AP35326 72 aa4.68□□□□□ -1.66
HOXA1-202ENST00000355633 MT1MQ8N339 61 aa4.68□□□□□ -1.66
HOXA1-202ENST00000355633 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
HOXA1-202ENST00000355633 MDN1Q9NU22 5596 aa4.62□□□□□ -1.67
HOXA1-202ENST00000355633 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
HOXA1-202ENST00000355633 SPRR2DP22532 72 aa4.5□□□□□ -1.69
HOXA1-202ENST00000355633 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
HOXA1-202ENST00000355633 NEBP20929 6669 aa4.41□□□□□ -1.7
HOXA1-202ENST00000355633 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
HOXA1-202ENST00000355633 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
HOXA1-202ENST00000355633 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
HOXA1-202ENST00000355633 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
HOXA1-202ENST00000355633 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
HOXA1-202ENST00000355633 MT1AP04731 61 aa4.13□□□□□ -1.75
HOXA1-202ENST00000355633 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
HOXA1-202ENST00000355633 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
HOXA1-202ENST00000355633 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
HOXA1-202ENST00000355633 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
HOXA1-202ENST00000355633 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
HOXA1-202ENST00000355633 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
HOXA1-202ENST00000355633 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
HOXA1-202ENST00000355633 MT4P47944 62 aa3.92□□□□□ -1.78
HOXA1-202ENST00000355633 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
HOXA1-202ENST00000355633 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
HOXA1-202ENST00000355633 MT3P25713 68 aa3.75□□□□□ -1.81
HOXA1-202ENST00000355633 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
HOXA1-202ENST00000355633 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
HOXA1-202ENST00000355633 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
HOXA1-202ENST00000355633 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
HOXA1-202ENST00000355633 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
HOXA1-202ENST00000355633 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
HOXA1-202ENST00000355633 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
HOXA1-202ENST00000355633 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
HOXA1-202ENST00000355633 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
HOXA1-202ENST00000355633 PRM1P04553 51 aa3.24□□□□□ -1.89
HOXA1-202ENST00000355633 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
HOXA1-202ENST00000355633 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
HOXA1-202ENST00000355633 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
HOXA1-202ENST00000355633 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
HOXA1-202ENST00000355633 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
HOXA1-202ENST00000355633 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
HOXA1-202ENST00000355633 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
HOXA1-202ENST00000355633 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
HOXA1-202ENST00000355633 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
HOXA1-202ENST00000355633 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
HOXA1-202ENST00000355633 LCE1FQ5T754 118 aa2.56□□□□□ -2
HOXA1-202ENST00000355633 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
HOXA1-202ENST00000355633 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
HOXA1-202ENST00000355633 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.06
HOXA1-202ENST00000355633 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
HOXA1-202ENST00000355633 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 55.3 ms