RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
SNU13-202ENST00000355257 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.69
SNU13-202ENST00000355257 MT1XP80297 61 aa4.46□□□□□ -1.7
SNU13-202ENST00000355257 KMT2DO14686 5537 aa4.45□□□□□ -1.7
SNU13-202ENST00000355257 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
SNU13-202ENST00000355257 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
SNU13-202ENST00000355257 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
SNU13-202ENST00000355257 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
SNU13-202ENST00000355257 KRTAP8-1Q8IUC2 63 aa4.39□□□□□ -1.71
SNU13-202ENST00000355257 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
SNU13-202ENST00000355257 KRTAP10-12P60413 245 aa4.31□□□□□ -1.72
SNU13-202ENST00000355257 KRTAP2-3P0C7H8 128 aa4.3□□□□□ -1.72
SNU13-202ENST00000355257 KRTAP2-4Q9BYR9 128 aa4.3□□□□□ -1.72
SNU13-202ENST00000355257 SPRR2FQ96RM1 72 aa4.28□□□□□ -1.72
SNU13-202ENST00000355257 KRTAP10-7P60409 375 aaPredicted RBP4.27□□□□□ -1.73
SNU13-202ENST00000355257 INE1O15225 51 aa4.26□□□□□ -1.73
SNU13-202ENST00000355257 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
SNU13-202ENST00000355257 SPRR2EP22531 72 aa4.25□□□□□ -1.73
SNU13-202ENST00000355257 SPRR2BP35325 72 aa4.25□□□□□ -1.73
SNU13-202ENST00000355257 SPRR2AP35326 72 aa4.25□□□□□ -1.73
SNU13-202ENST00000355257 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
SNU13-202ENST00000355257 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
SNU13-202ENST00000355257 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
SNU13-202ENST00000355257 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.75
SNU13-202ENST00000355257 KRTAP2-1Q9BYU5 128 aa4.15□□□□□ -1.75
SNU13-202ENST00000355257 SPRR2DP22532 72 aa4.11□□□□□ -1.75
SNU13-202ENST00000355257 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
SNU13-202ENST00000355257 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
SNU13-202ENST00000355257 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
SNU13-202ENST00000355257 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
SNU13-202ENST00000355257 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
SNU13-202ENST00000355257 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
SNU13-202ENST00000355257 MT1EP04732 61 aa3.88□□□□□ -1.79
SNU13-202ENST00000355257 MT1LQ93083 61 aa3.85□□□□□ -1.79
SNU13-202ENST00000355257 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
SNU13-202ENST00000355257 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
SNU13-202ENST00000355257 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
SNU13-202ENST00000355257 GPR98Q8WXG9 6306 aa3.79□□□□□ -1.8
SNU13-202ENST00000355257 MT1GP13640 62 aa3.71□□□□□ -1.82
SNU13-202ENST00000355257 MT1MQ8N339 61 aa3.67□□□□□ -1.82
SNU13-202ENST00000355257 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
SNU13-202ENST00000355257 MT4P47944 62 aa3.6□□□□□ -1.83
SNU13-202ENST00000355257 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
SNU13-202ENST00000355257 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
SNU13-202ENST00000355257 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
SNU13-202ENST00000355257 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
SNU13-202ENST00000355257 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
SNU13-202ENST00000355257 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
SNU13-202ENST00000355257 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
SNU13-202ENST00000355257 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
SNU13-202ENST00000355257 MT1AP04731 61 aa3.27□□□□□ -1.89
SNU13-202ENST00000355257 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
SNU13-202ENST00000355257 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
SNU13-202ENST00000355257 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
SNU13-202ENST00000355257 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
SNU13-202ENST00000355257 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
SNU13-202ENST00000355257 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
SNU13-202ENST00000355257 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
SNU13-202ENST00000355257 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
SNU13-202ENST00000355257 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
SNU13-202ENST00000355257 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
SNU13-202ENST00000355257 MT3P25713 68 aa2.94□□□□□ -1.94
SNU13-202ENST00000355257 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
SNU13-202ENST00000355257 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
SNU13-202ENST00000355257 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
SNU13-202ENST00000355257 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
SNU13-202ENST00000355257 PRM1P04553 51 aa2.82□□□□□ -1.96
SNU13-202ENST00000355257 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
SNU13-202ENST00000355257 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
SNU13-202ENST00000355257 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
SNU13-202ENST00000355257 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
SNU13-202ENST00000355257 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
SNU13-202ENST00000355257 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
SNU13-202ENST00000355257 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
SNU13-202ENST00000355257 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
SNU13-202ENST00000355257 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
SNU13-202ENST00000355257 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 110.8 ms