RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 LCE5AQ5TCM9 118 aa5.77□□□□□ -1.49
TSPAN4-201ENST00000346501 SVIPQ8NHG7 77 aa5.76□□□□□ -1.49
TSPAN4-201ENST00000346501 A6NED7 52 aa5.75□□□□□ -1.49
TSPAN4-201ENST00000346501 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
TSPAN4-201ENST00000346501 CDC42SE1Q9NRR8 79 aa5.74□□□□□ -1.49
TSPAN4-201ENST00000346501 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
TSPAN4-201ENST00000346501 MT1GP13640 62 aa5.71□□□□□ -1.5
TSPAN4-201ENST00000346501 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
TSPAN4-201ENST00000346501 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
TSPAN4-201ENST00000346501 MT1LQ93083 61 aa5.6□□□□□ -1.51
TSPAN4-201ENST00000346501 MT1MQ8N339 61 aa5.56□□□□□ -1.52
TSPAN4-201ENST00000346501 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
TSPAN4-201ENST00000346501 PMAIP1Q13794 54 aa5.48□□□□□ -1.53
TSPAN4-201ENST00000346501 GPR98Q8WXG9 6306 aa5.48□□□□□ -1.53
TSPAN4-201ENST00000346501 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
TSPAN4-201ENST00000346501 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
TSPAN4-201ENST00000346501 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
TSPAN4-201ENST00000346501 KTN1-AS1Q86SY8 53 aa5.38□□□□□ -1.55
TSPAN4-201ENST00000346501 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
TSPAN4-201ENST00000346501 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
TSPAN4-201ENST00000346501 ROMO1P60602 79 aa5.3□□□□□ -1.56
TSPAN4-201ENST00000346501 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
TSPAN4-201ENST00000346501 MT4P47944 62 aa5.28□□□□□ -1.56
TSPAN4-201ENST00000346501 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
TSPAN4-201ENST00000346501 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
TSPAN4-201ENST00000346501 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
TSPAN4-201ENST00000346501 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
TSPAN4-201ENST00000346501 PRAC1Q96KF2 57 aa5.11□□□□□ -1.59
TSPAN4-201ENST00000346501 LCE3CQ5T5A8 94 aa5.1□□□□□ -1.59
TSPAN4-201ENST00000346501 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
TSPAN4-201ENST00000346501 AHNAK2Q8IVF2 5795 aa5.07□□□□□ -1.6
TSPAN4-201ENST00000346501 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
TSPAN4-201ENST00000346501 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
TSPAN4-201ENST00000346501 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
TSPAN4-201ENST00000346501 KRTAP5-10Q6L8G5 202 aa4.98□□□□□ -1.61
TSPAN4-201ENST00000346501 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
TSPAN4-201ENST00000346501 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
TSPAN4-201ENST00000346501 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
TSPAN4-201ENST00000346501 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
TSPAN4-201ENST00000346501 MT1AP04731 61 aa4.8□□□□□ -1.64
TSPAN4-201ENST00000346501 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
TSPAN4-201ENST00000346501 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
TSPAN4-201ENST00000346501 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
TSPAN4-201ENST00000346501 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
TSPAN4-201ENST00000346501 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
TSPAN4-201ENST00000346501 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
TSPAN4-201ENST00000346501 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
TSPAN4-201ENST00000346501 MT3P25713 68 aa4.44□□□□□ -1.7
TSPAN4-201ENST00000346501 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
TSPAN4-201ENST00000346501 KRTAP5-8O75690 187 aa4.3□□□□□ -1.72
TSPAN4-201ENST00000346501 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
TSPAN4-201ENST00000346501 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
TSPAN4-201ENST00000346501 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
TSPAN4-201ENST00000346501 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
TSPAN4-201ENST00000346501 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
TSPAN4-201ENST00000346501 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
TSPAN4-201ENST00000346501 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
TSPAN4-201ENST00000346501 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
TSPAN4-201ENST00000346501 H3BS24 57 aa3.89□□□□□ -1.79
TSPAN4-201ENST00000346501 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
TSPAN4-201ENST00000346501 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
TSPAN4-201ENST00000346501 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
TSPAN4-201ENST00000346501 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
TSPAN4-201ENST00000346501 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
TSPAN4-201ENST00000346501 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
TSPAN4-201ENST00000346501 INE1O15225 51 aa3.52□□□□□ -1.85
TSPAN4-201ENST00000346501 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
TSPAN4-201ENST00000346501 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
TSPAN4-201ENST00000346501 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
TSPAN4-201ENST00000346501 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
TSPAN4-201ENST00000346501 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
TSPAN4-201ENST00000346501 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
TSPAN4-201ENST00000346501 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
TSPAN4-201ENST00000346501 PRM1P04553 51 aa2.69□□□□□ -1.98
TSPAN4-201ENST00000346501 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
TSPAN4-201ENST00000346501 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
TSPAN4-201ENST00000346501 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 67.6 ms