RNA–Protein interactions for RNA: ENST00000346403.10

SNRPN-201, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,304 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-201ENST00000346403 MT1GP13640 62 aa5.73□□□□□ -1.49
SNRPN-201ENST00000346403 TNP1P09430 55 aa5.72□□□□□ -1.49
SNRPN-201ENST00000346403 PP632Q6XCG6 107 aa5.72□□□□□ -1.49
SNRPN-201ENST00000346403 LINC01558Q9Y6Z2 57 aa5.7□□□□□ -1.5
SNRPN-201ENST00000346403 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
SNRPN-201ENST00000346403 TMEM258P61165 79 aa5.64□□□□□ -1.51
SNRPN-201ENST00000346403 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
SNRPN-201ENST00000346403 MT1LQ93083 61 aa5.62□□□□□ -1.51
SNRPN-201ENST00000346403 MT1MQ8N339 61 aa5.6□□□□□ -1.51
SNRPN-201ENST00000346403 UQCR11O14957 56 aa5.59□□□□□ -1.51
SNRPN-201ENST00000346403 GPR98Q8WXG9 6306 aa5.55□□□□□ -1.52
SNRPN-201ENST00000346403 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
SNRPN-201ENST00000346403 MIR22HGQ0VDD5 57 aa5.46□□□□□ -1.54
SNRPN-201ENST00000346403 PCP4P48539 62 aa5.45□□□□□ -1.54
SNRPN-201ENST00000346403 KRTAP4-3Q9BYR4 195 aa5.45□□□□□ -1.54
SNRPN-201ENST00000346403 K7ERS5 55 aa5.41□□□□□ -1.54
SNRPN-201ENST00000346403 MT4P47944 62 aa5.4□□□□□ -1.55
SNRPN-201ENST00000346403 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
SNRPN-201ENST00000346403 V9GYY9 64 aa5.38□□□□□ -1.55
SNRPN-201ENST00000346403 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
SNRPN-201ENST00000346403 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
SNRPN-201ENST00000346403 PSPHP1O15172 72 aa5.32□□□□□ -1.56
SNRPN-201ENST00000346403 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
SNRPN-201ENST00000346403 Q1T7F1 81 aa5.29□□□□□ -1.56
SNRPN-201ENST00000346403 RPS28P62857 69 aaKnown RBP5.23□□□□□ -1.57
SNRPN-201ENST00000346403 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
SNRPN-201ENST00000346403 A6NED7 52 aa5.17□□□□□ -1.58
SNRPN-201ENST00000346403 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.58
SNRPN-201ENST00000346403 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
SNRPN-201ENST00000346403 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
SNRPN-201ENST00000346403 CDC42SE1Q9NRR8 79 aa5.08□□□□□ -1.6
SNRPN-201ENST00000346403 KRTAP5-10Q6L8G5 202 aa5.06□□□□□ -1.6
SNRPN-201ENST00000346403 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
SNRPN-201ENST00000346403 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
SNRPN-201ENST00000346403 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
SNRPN-201ENST00000346403 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
SNRPN-201ENST00000346403 ROMO1P60602 79 aa4.98□□□□□ -1.61
SNRPN-201ENST00000346403 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
SNRPN-201ENST00000346403 KRTAP5-7Q6L8G8 165 aa4.88□□□□□ -1.63
SNRPN-201ENST00000346403 MT1AP04731 61 aa4.79□□□□□ -1.64
SNRPN-201ENST00000346403 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
SNRPN-201ENST00000346403 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
SNRPN-201ENST00000346403 KRTAP5-2Q701N4 177 aa4.68□□□□□ -1.66
SNRPN-201ENST00000346403 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
SNRPN-201ENST00000346403 KRTAP6-2Q3LI66 62 aa4.55□□□□□ -1.68
SNRPN-201ENST00000346403 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.7
SNRPN-201ENST00000346403 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
SNRPN-201ENST00000346403 MT3P25713 68 aa4.41□□□□□ -1.7
SNRPN-201ENST00000346403 PMAIP1Q13794 54 aa4.37□□□□□ -1.71
SNRPN-201ENST00000346403 SVIPQ8NHG7 77 aa4.34□□□□□ -1.71
SNRPN-201ENST00000346403 PRO0628Q9UI54 55 aa4.33□□□□□ -1.72
SNRPN-201ENST00000346403 H3BS24 57 aa4.31□□□□□ -1.72
SNRPN-201ENST00000346403 AHNAKQ09666 5890 aaKnown RBP4.3□□□□□ -1.72
SNRPN-201ENST00000346403 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
SNRPN-201ENST00000346403 MUC5ACP98088 5654 aa4.28□□□□□ -1.72
SNRPN-201ENST00000346403 MUC5BQ9HC84 5762 aaPredicted RBP4.28□□□□□ -1.72
SNRPN-201ENST00000346403 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
SNRPN-201ENST00000346403 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
SNRPN-201ENST00000346403 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
SNRPN-201ENST00000346403 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
SNRPN-201ENST00000346403 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
SNRPN-201ENST00000346403 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
SNRPN-201ENST00000346403 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
SNRPN-201ENST00000346403 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
SNRPN-201ENST00000346403 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
SNRPN-201ENST00000346403 LUZP6Q538Z0 58 aa3.47□□□□□ -1.85
SNRPN-201ENST00000346403 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
SNRPN-201ENST00000346403 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
SNRPN-201ENST00000346403 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
SNRPN-201ENST00000346403 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
SNRPN-201ENST00000346403 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
SNRPN-201ENST00000346403 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
SNRPN-201ENST00000346403 A0A0A0MQY5 61 aa2.6□□□□□ -1.99
SNRPN-201ENST00000346403 INE1O15225 51 aa2.55□□□□□ -2
SNRPN-201ENST00000346403 PRM1P04553 51 aa2.53□□□□□ -2
SNRPN-201ENST00000346403 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
SNRPN-201ENST00000346403 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 155 ms