RNA–Protein interactions for RNA: ENST00000345868.8

SPO11-201, Transcript of SPO11, initiator of meiotic double stranded breaks, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPO11, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPO11-201ENST00000345868 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
SPO11-201ENST00000345868 FCGBPQ9Y6R7 5405 aaPredicted RBP5.03□□□□□ -1.6
SPO11-201ENST00000345868 KMT2DO14686 5537 aa4.99□□□□□ -1.61
SPO11-201ENST00000345868 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
SPO11-201ENST00000345868 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
SPO11-201ENST00000345868 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
SPO11-201ENST00000345868 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
SPO11-201ENST00000345868 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
SPO11-201ENST00000345868 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
SPO11-201ENST00000345868 KRTAP19-7Q3SYF9 63 aa4.8□□□□□ -1.64
SPO11-201ENST00000345868 MACF1Q9UPN3 7388 aaKnown RBP4.76□□□□□ -1.65
SPO11-201ENST00000345868 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
SPO11-201ENST00000345868 LUZP6Q538Z0 58 aa4.73□□□□□ -1.65
SPO11-201ENST00000345868 MT1EP04732 61 aa4.72□□□□□ -1.65
SPO11-201ENST00000345868 MT1LQ93083 61 aa4.63□□□□□ -1.67
SPO11-201ENST00000345868 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
SPO11-201ENST00000345868 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
SPO11-201ENST00000345868 KRTAP5-9P26371 169 aa4.57□□□□□ -1.68
SPO11-201ENST00000345868 SYNE2Q8WXH0 6885 aaKnown RBP4.56□□□□□ -1.68
SPO11-201ENST00000345868 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
SPO11-201ENST00000345868 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
SPO11-201ENST00000345868 MDN1Q9NU22 5596 aa4.49□□□□□ -1.69
SPO11-201ENST00000345868 MT1GP13640 62 aa4.48□□□□□ -1.69
SPO11-201ENST00000345868 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
SPO11-201ENST00000345868 MT1MQ8N339 61 aa4.44□□□□□ -1.7
SPO11-201ENST00000345868 LCE1AQ5T7P2 110 aa4.42□□□□□ -1.7
SPO11-201ENST00000345868 SPRR2EP22531 72 aa4.38□□□□□ -1.71
SPO11-201ENST00000345868 SPRR2BP35325 72 aa4.38□□□□□ -1.71
SPO11-201ENST00000345868 SPRR2AP35326 72 aa4.38□□□□□ -1.71
SPO11-201ENST00000345868 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
SPO11-201ENST00000345868 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
SPO11-201ENST00000345868 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
SPO11-201ENST00000345868 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
SPO11-201ENST00000345868 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
SPO11-201ENST00000345868 SPRR2DP22532 72 aa4.22□□□□□ -1.73
SPO11-201ENST00000345868 NEBP20929 6669 aa4.14□□□□□ -1.75
SPO11-201ENST00000345868 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
SPO11-201ENST00000345868 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
SPO11-201ENST00000345868 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
SPO11-201ENST00000345868 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
SPO11-201ENST00000345868 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
SPO11-201ENST00000345868 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
SPO11-201ENST00000345868 INE1O15225 51 aa4□□□□□ -1.77
SPO11-201ENST00000345868 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
SPO11-201ENST00000345868 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
SPO11-201ENST00000345868 MT1AP04731 61 aa3.92□□□□□ -1.78
SPO11-201ENST00000345868 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
SPO11-201ENST00000345868 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.8
SPO11-201ENST00000345868 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
SPO11-201ENST00000345868 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
SPO11-201ENST00000345868 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
SPO11-201ENST00000345868 MT4P47944 62 aa3.67□□□□□ -1.82
SPO11-201ENST00000345868 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
SPO11-201ENST00000345868 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
SPO11-201ENST00000345868 MT3P25713 68 aa3.59□□□□□ -1.84
SPO11-201ENST00000345868 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
SPO11-201ENST00000345868 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
SPO11-201ENST00000345868 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
SPO11-201ENST00000345868 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
SPO11-201ENST00000345868 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
SPO11-201ENST00000345868 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
SPO11-201ENST00000345868 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
SPO11-201ENST00000345868 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
SPO11-201ENST00000345868 PRM1P04553 51 aa3.06□□□□□ -1.92
SPO11-201ENST00000345868 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
SPO11-201ENST00000345868 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
SPO11-201ENST00000345868 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
SPO11-201ENST00000345868 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
SPO11-201ENST00000345868 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
SPO11-201ENST00000345868 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
SPO11-201ENST00000345868 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
SPO11-201ENST00000345868 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
SPO11-201ENST00000345868 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
SPO11-201ENST00000345868 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
SPO11-201ENST00000345868 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
SPO11-201ENST00000345868 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
SPO11-201ENST00000345868 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 50.9 ms