RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 A8MU10 97 aa4.82□□□□□ -1.64
SNCA-202ENST00000345009 KRTAP12-2P59991 146 aa4.81□□□□□ -1.64
SNCA-202ENST00000345009 KRTAP6-3Q3LI67 103 aa4.79□□□□□ -1.64
SNCA-202ENST00000345009 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
SNCA-202ENST00000345009 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
SNCA-202ENST00000345009 MIR22HGQ0VDD5 57 aa4.78□□□□□ -1.64
SNCA-202ENST00000345009 SYNE2Q8WXH0 6885 aaKnown RBP4.78□□□□□ -1.64
SNCA-202ENST00000345009 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
SNCA-202ENST00000345009 KRTAP10-12P60413 245 aa4.71□□□□□ -1.66
SNCA-202ENST00000345009 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
SNCA-202ENST00000345009 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
SNCA-202ENST00000345009 KMT2DO14686 5537 aa4.63□□□□□ -1.67
SNCA-202ENST00000345009 TNP1P09430 55 aa4.61□□□□□ -1.67
SNCA-202ENST00000345009 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
SNCA-202ENST00000345009 SPRR2FQ96RM1 72 aa4.61□□□□□ -1.67
SNCA-202ENST00000345009 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
SNCA-202ENST00000345009 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
SNCA-202ENST00000345009 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
SNCA-202ENST00000345009 MDN1Q9NU22 5596 aa4.49□□□□□ -1.69
SNCA-202ENST00000345009 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
SNCA-202ENST00000345009 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
SNCA-202ENST00000345009 SPRR2EP22531 72 aa4.47□□□□□ -1.69
SNCA-202ENST00000345009 SPRR2BP35325 72 aa4.47□□□□□ -1.69
SNCA-202ENST00000345009 SPRR2AP35326 72 aa4.47□□□□□ -1.69
SNCA-202ENST00000345009 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
SNCA-202ENST00000345009 NEBP20929 6669 aa4.46□□□□□ -1.7
SNCA-202ENST00000345009 KRTAP4-4Q9BYR3 166 aa4.45□□□□□ -1.7
SNCA-202ENST00000345009 LCE3AQ5TA76 89 aa4.4□□□□□ -1.71
SNCA-202ENST00000345009 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
SNCA-202ENST00000345009 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
SNCA-202ENST00000345009 MT1EP04732 61 aa4.36□□□□□ -1.71
SNCA-202ENST00000345009 SPRR2DP22532 72 aa4.33□□□□□ -1.72
SNCA-202ENST00000345009 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
SNCA-202ENST00000345009 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
SNCA-202ENST00000345009 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
SNCA-202ENST00000345009 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
SNCA-202ENST00000345009 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
SNCA-202ENST00000345009 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
SNCA-202ENST00000345009 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
SNCA-202ENST00000345009 MT1GP13640 62 aa4.25□□□□□ -1.73
SNCA-202ENST00000345009 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
SNCA-202ENST00000345009 MT1LQ93083 61 aa4.21□□□□□ -1.74
SNCA-202ENST00000345009 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
SNCA-202ENST00000345009 MT1MQ8N339 61 aa4.13□□□□□ -1.75
SNCA-202ENST00000345009 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
SNCA-202ENST00000345009 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
SNCA-202ENST00000345009 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
SNCA-202ENST00000345009 INE1O15225 51 aa3.97□□□□□ -1.77
SNCA-202ENST00000345009 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
SNCA-202ENST00000345009 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
SNCA-202ENST00000345009 MT4P47944 62 aa3.75□□□□□ -1.81
SNCA-202ENST00000345009 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
SNCA-202ENST00000345009 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
SNCA-202ENST00000345009 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
SNCA-202ENST00000345009 SPRR5A0A1B0GTR4 108 aa3.61□□□□□ -1.83
SNCA-202ENST00000345009 MT1AP04731 61 aa3.6□□□□□ -1.83
SNCA-202ENST00000345009 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
SNCA-202ENST00000345009 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
SNCA-202ENST00000345009 SYNE1Q8NF91 8797 aaKnown RBP3.51□□□□□ -1.85
SNCA-202ENST00000345009 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
SNCA-202ENST00000345009 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
SNCA-202ENST00000345009 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
SNCA-202ENST00000345009 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
SNCA-202ENST00000345009 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
SNCA-202ENST00000345009 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
SNCA-202ENST00000345009 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
SNCA-202ENST00000345009 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
SNCA-202ENST00000345009 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
SNCA-202ENST00000345009 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
SNCA-202ENST00000345009 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
SNCA-202ENST00000345009 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
SNCA-202ENST00000345009 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
SNCA-202ENST00000345009 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
SNCA-202ENST00000345009 PRM1P04553 51 aa2.22□□□□□ -2.05
SNCA-202ENST00000345009 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
SNCA-202ENST00000345009 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
SNCA-202ENST00000345009 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 225.1 ms