RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
CDC42-202ENST00000344548 SPRR2FQ96RM1 72 aa4.75□□□□□ -1.65
CDC42-202ENST00000344548 KRTAP9-6A0A140TA67 174 aa4.67□□□□□ -1.66
CDC42-202ENST00000344548 KRTAP19-3Q7Z4W3 81 aa4.67□□□□□ -1.66
CDC42-202ENST00000344548 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
CDC42-202ENST00000344548 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
CDC42-202ENST00000344548 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
CDC42-202ENST00000344548 MDN1Q9NU22 5596 aa4.61□□□□□ -1.67
CDC42-202ENST00000344548 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
CDC42-202ENST00000344548 MT1MQ8N339 61 aa4.61□□□□□ -1.67
CDC42-202ENST00000344548 MT1GP13640 62 aa4.6□□□□□ -1.67
CDC42-202ENST00000344548 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
CDC42-202ENST00000344548 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
CDC42-202ENST00000344548 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
CDC42-202ENST00000344548 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
CDC42-202ENST00000344548 LOC100996750A0A140TA64 210 aa4.51□□□□□ -1.69
CDC42-202ENST00000344548 INE1O15225 51 aa4.49□□□□□ -1.69
CDC42-202ENST00000344548 KRTAP6-3Q3LI67 103 aa4.47□□□□□ -1.69
CDC42-202ENST00000344548 SPRR2EP22531 72 aa4.46□□□□□ -1.7
CDC42-202ENST00000344548 SPRR2BP35325 72 aa4.46□□□□□ -1.7
CDC42-202ENST00000344548 SPRR2AP35326 72 aa4.46□□□□□ -1.7
CDC42-202ENST00000344548 KRTAP9-7A8MTY7 169 aa4.31□□□□□ -1.72
CDC42-202ENST00000344548 SPRR2DP22532 72 aa4.27□□□□□ -1.73
CDC42-202ENST00000344548 NEBP20929 6669 aa4.24□□□□□ -1.73
CDC42-202ENST00000344548 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
CDC42-202ENST00000344548 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
CDC42-202ENST00000344548 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
CDC42-202ENST00000344548 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
CDC42-202ENST00000344548 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
CDC42-202ENST00000344548 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
CDC42-202ENST00000344548 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
CDC42-202ENST00000344548 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
CDC42-202ENST00000344548 MT1AP04731 61 aa4.05□□□□□ -1.76
CDC42-202ENST00000344548 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
CDC42-202ENST00000344548 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
CDC42-202ENST00000344548 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
CDC42-202ENST00000344548 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
CDC42-202ENST00000344548 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
CDC42-202ENST00000344548 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
CDC42-202ENST00000344548 MT4P47944 62 aa3.78□□□□□ -1.8
CDC42-202ENST00000344548 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
CDC42-202ENST00000344548 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
CDC42-202ENST00000344548 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
CDC42-202ENST00000344548 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
CDC42-202ENST00000344548 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
CDC42-202ENST00000344548 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
CDC42-202ENST00000344548 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.82
CDC42-202ENST00000344548 MT3P25713 68 aa3.64□□□□□ -1.83
CDC42-202ENST00000344548 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
CDC42-202ENST00000344548 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
CDC42-202ENST00000344548 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
CDC42-202ENST00000344548 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
CDC42-202ENST00000344548 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
CDC42-202ENST00000344548 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
CDC42-202ENST00000344548 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
CDC42-202ENST00000344548 PRM1P04553 51 aa3.14□□□□□ -1.91
CDC42-202ENST00000344548 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
CDC42-202ENST00000344548 AHNAK2Q8IVF2 5795 aa3.13□□□□□ -1.91
CDC42-202ENST00000344548 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
CDC42-202ENST00000344548 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
CDC42-202ENST00000344548 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
CDC42-202ENST00000344548 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
CDC42-202ENST00000344548 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
CDC42-202ENST00000344548 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
CDC42-202ENST00000344548 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
CDC42-202ENST00000344548 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
CDC42-202ENST00000344548 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
CDC42-202ENST00000344548 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
CDC42-202ENST00000344548 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
CDC42-202ENST00000344548 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
CDC42-202ENST00000344548 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
CDC42-202ENST00000344548 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
CDC42-202ENST00000344548 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
CDC42-202ENST00000344548 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
CDC42-202ENST00000344548 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
CDC42-202ENST00000344548 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
CDC42-202ENST00000344548 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms