RNA–Protein interactions for RNA: ENST00000343705.3

PDCD1-202, Transcript of programmed cell death 1, humanhuman

TSL 1 (best)

Gene PDCD1, Length 366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-202ENST00000343705 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
PDCD1-202ENST00000343705 PRO0628Q9UI54 55 aa4.54□□□□□ -1.68
PDCD1-202ENST00000343705 ROMO1P60602 79 aa4.52□□□□□ -1.69
PDCD1-202ENST00000343705 TNP1P09430 55 aa4.51□□□□□ -1.69
PDCD1-202ENST00000343705 MT1GP13640 62 aa4.48□□□□□ -1.69
PDCD1-202ENST00000343705 PMAIP1Q13794 54 aa4.48□□□□□ -1.69
PDCD1-202ENST00000343705 PP632Q6XCG6 107 aa4.48□□□□□ -1.69
PDCD1-202ENST00000343705 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
PDCD1-202ENST00000343705 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
PDCD1-202ENST00000343705 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
PDCD1-202ENST00000343705 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
PDCD1-202ENST00000343705 MT1LQ93083 61 aa4.36□□□□□ -1.71
PDCD1-202ENST00000343705 MT1MQ8N339 61 aa4.34□□□□□ -1.71
PDCD1-202ENST00000343705 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
PDCD1-202ENST00000343705 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
PDCD1-202ENST00000343705 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
PDCD1-202ENST00000343705 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
PDCD1-202ENST00000343705 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
PDCD1-202ENST00000343705 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
PDCD1-202ENST00000343705 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
PDCD1-202ENST00000343705 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
PDCD1-202ENST00000343705 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
PDCD1-202ENST00000343705 MT4P47944 62 aa4.16□□□□□ -1.74
PDCD1-202ENST00000343705 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
PDCD1-202ENST00000343705 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
PDCD1-202ENST00000343705 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
PDCD1-202ENST00000343705 KRTAP15-1Q3LI76 137 aa4.04□□□□□ -1.76
PDCD1-202ENST00000343705 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.76
PDCD1-202ENST00000343705 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
PDCD1-202ENST00000343705 SVIPQ8NHG7 77 aa3.99□□□□□ -1.77
PDCD1-202ENST00000343705 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
PDCD1-202ENST00000343705 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
PDCD1-202ENST00000343705 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
PDCD1-202ENST00000343705 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
PDCD1-202ENST00000343705 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
PDCD1-202ENST00000343705 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
PDCD1-202ENST00000343705 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
PDCD1-202ENST00000343705 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
PDCD1-202ENST00000343705 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
PDCD1-202ENST00000343705 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
PDCD1-202ENST00000343705 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
PDCD1-202ENST00000343705 MT1AP04731 61 aa3.73□□□□□ -1.81
PDCD1-202ENST00000343705 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
PDCD1-202ENST00000343705 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
PDCD1-202ENST00000343705 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
PDCD1-202ENST00000343705 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
PDCD1-202ENST00000343705 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
PDCD1-202ENST00000343705 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
PDCD1-202ENST00000343705 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
PDCD1-202ENST00000343705 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
PDCD1-202ENST00000343705 MT3P25713 68 aa3.45□□□□□ -1.86
PDCD1-202ENST00000343705 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
PDCD1-202ENST00000343705 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
PDCD1-202ENST00000343705 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
PDCD1-202ENST00000343705 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
PDCD1-202ENST00000343705 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
PDCD1-202ENST00000343705 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
PDCD1-202ENST00000343705 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
PDCD1-202ENST00000343705 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
PDCD1-202ENST00000343705 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
PDCD1-202ENST00000343705 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
PDCD1-202ENST00000343705 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
PDCD1-202ENST00000343705 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
PDCD1-202ENST00000343705 A0A0A0MQY5 61 aa2.83□□□□□ -1.96
PDCD1-202ENST00000343705 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
PDCD1-202ENST00000343705 INE1O15225 51 aa2.71□□□□□ -1.98
PDCD1-202ENST00000343705 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
PDCD1-202ENST00000343705 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
PDCD1-202ENST00000343705 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
PDCD1-202ENST00000343705 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
PDCD1-202ENST00000343705 H3BS24 57 aa2.48□□□□□ -2.01
PDCD1-202ENST00000343705 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
PDCD1-202ENST00000343705 PRM1P04553 51 aa2.33□□□□□ -2.04
PDCD1-202ENST00000343705 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
PDCD1-202ENST00000343705 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
PDCD1-202ENST00000343705 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
PDCD1-202ENST00000343705 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
PDCD1-202ENST00000343705 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 67.4 ms