RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 LCE3BQ5TA77 95 aa6.99□□□□□ -1.29
USF2-202ENST00000343550 KRTAP4-12Q9BQ66 201 aa6.89□□□□□ -1.31
USF2-202ENST00000343550 PMAIP1Q13794 54 aa6.86□□□□□ -1.31
USF2-202ENST00000343550 C10orf95Q9H7T3 257 aa6.77□□□□□ -1.33
USF2-202ENST00000343550 KRTAP19-7Q3SYF9 63 aa6.75□□□□□ -1.33
USF2-202ENST00000343550 DSTQ03001 7570 aaKnown RBP6.73□□□□□ -1.33
USF2-202ENST00000343550 KTN1-AS1Q86SY8 53 aa6.73□□□□□ -1.33
USF2-202ENST00000343550 K7ERS5 55 aa6.71□□□□□ -1.34
USF2-202ENST00000343550 TNP1P09430 55 aa6.68□□□□□ -1.34
USF2-202ENST00000343550 LCE5AQ5TCM9 118 aa6.68□□□□□ -1.34
USF2-202ENST00000343550 MT1EP04732 61 aa6.66□□□□□ -1.34
USF2-202ENST00000343550 GPR98Q8WXG9 6306 aa6.63□□□□□ -1.35
USF2-202ENST00000343550 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
USF2-202ENST00000343550 KRTAP19-3Q7Z4W3 81 aa6.62□□□□□ -1.35
USF2-202ENST00000343550 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
USF2-202ENST00000343550 LCE4AQ5TA78 99 aa6.58□□□□□ -1.36
USF2-202ENST00000343550 KRTAP4-9Q9BYQ8 210 aa6.57□□□□□ -1.36
USF2-202ENST00000343550 KRTAP9-9Q9BYP9 154 aa6.52□□□□□ -1.37
USF2-202ENST00000343550 KRTAP9-4Q9BYQ2 154 aa6.52□□□□□ -1.37
USF2-202ENST00000343550 MT1GP13640 62 aa6.45□□□□□ -1.38
USF2-202ENST00000343550 ROMO1P60602 79 aa6.42□□□□□ -1.38
USF2-202ENST00000343550 MT1LQ93083 61 aa6.41□□□□□ -1.38
USF2-202ENST00000343550 KRTAP25-1Q3LHN0 102 aa6.4□□□□□ -1.38
USF2-202ENST00000343550 LCE1DQ5T752 114 aa6.39□□□□□ -1.39
USF2-202ENST00000343550 PP632Q6XCG6 107 aa6.39□□□□□ -1.39
USF2-202ENST00000343550 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
USF2-202ENST00000343550 MT1MQ8N339 61 aa6.33□□□□□ -1.4
USF2-202ENST00000343550 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
USF2-202ENST00000343550 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
USF2-202ENST00000343550 MT4P47944 62 aa6.3□□□□□ -1.4
USF2-202ENST00000343550 HMCN1Q96RW7 5635 aa6.25□□□□□ -1.41
USF2-202ENST00000343550 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
USF2-202ENST00000343550 KRTAP4-3Q9BYR4 195 aa6.2□□□□□ -1.42
USF2-202ENST00000343550 KRTAP5-4Q6L8H1 288 aa6.16□□□□□ -1.42
USF2-202ENST00000343550 AHNAK2Q8IVF2 5795 aa6.1□□□□□ -1.43
USF2-202ENST00000343550 A0A0A0MQY5 61 aa6.06□□□□□ -1.44
USF2-202ENST00000343550 KRTAP5-10Q6L8G5 202 aa6.04□□□□□ -1.44
USF2-202ENST00000343550 KRTAP4-2Q9BYR5 136 aa6.03□□□□□ -1.44
USF2-202ENST00000343550 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
USF2-202ENST00000343550 KRTAP4-11Q9BYQ6 195 aa5.87□□□□□ -1.47
USF2-202ENST00000343550 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
USF2-202ENST00000343550 KRTAP5-7Q6L8G8 165 aa5.84□□□□□ -1.47
USF2-202ENST00000343550 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
USF2-202ENST00000343550 KRTAP5-5Q701N2 237 aaPredicted RBP5.82□□□□□ -1.48
USF2-202ENST00000343550 SPRR5A0A1B0GTR4 108 aa5.79□□□□□ -1.48
USF2-202ENST00000343550 KRTAP12-4P60329 112 aa5.74□□□□□ -1.49
USF2-202ENST00000343550 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
USF2-202ENST00000343550 KRTAP9-6A8MVA2 160 aa5.54□□□□□ -1.52
USF2-202ENST00000343550 MT1AP04731 61 aa5.45□□□□□ -1.54
USF2-202ENST00000343550 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
USF2-202ENST00000343550 KRTAP5-2Q701N4 177 aa5.36□□□□□ -1.55
USF2-202ENST00000343550 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
USF2-202ENST00000343550 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
USF2-202ENST00000343550 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
USF2-202ENST00000343550 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.58
USF2-202ENST00000343550 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
USF2-202ENST00000343550 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
USF2-202ENST00000343550 AHNAKQ09666 5890 aaKnown RBP5.06□□□□□ -1.6
USF2-202ENST00000343550 MUC5BQ9HC84 5762 aaPredicted RBP5.03□□□□□ -1.6
USF2-202ENST00000343550 MT3P25713 68 aa4.98□□□□□ -1.61
USF2-202ENST00000343550 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
USF2-202ENST00000343550 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
USF2-202ENST00000343550 INE1O15225 51 aa4.53□□□□□ -1.68
USF2-202ENST00000343550 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
USF2-202ENST00000343550 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
USF2-202ENST00000343550 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
USF2-202ENST00000343550 LCE1CQ5T751 118 aa4.24□□□□□ -1.73
USF2-202ENST00000343550 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
USF2-202ENST00000343550 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
USF2-202ENST00000343550 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
USF2-202ENST00000343550 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
USF2-202ENST00000343550 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
USF2-202ENST00000343550 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
USF2-202ENST00000343550 PRM1P04553 51 aa3.34□□□□□ -1.87
USF2-202ENST00000343550 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
USF2-202ENST00000343550 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
USF2-202ENST00000343550 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 21.2 ms