RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 KRTAP8-1Q8IUC2 63 aa1□□□□□ -2.25
LRRC39-201ENST00000342895 MAST4O15021 2626 aa0.99□□□□□ -2.25
LRRC39-201ENST00000342895 IGSF10Q6WRI0 2623 aa0.99□□□□□ -2.25
LRRC39-201ENST00000342895 MYO9AB2RTY4 2548 aa0.99□□□□□ -2.25
LRRC39-201ENST00000342895 TENM1Q9UKZ4 2725 aa0.98□□□□□ -2.25
LRRC39-201ENST00000342895 KRTAP21-3Q3LHN1 58 aa0.97□□□□□ -2.25
LRRC39-201ENST00000342895 PLECQ15149 4684 aaKnown RBP0.96□□□□□ -2.26
LRRC39-201ENST00000342895 LPAP08519 4548 aa0.94□□□□□ -2.26
LRRC39-201ENST00000342895 DYNC1H1Q14204 4646 aaKnown RBP0.94□□□□□ -2.26
LRRC39-201ENST00000342895 DNAH5Q8TE73 4624 aa0.94□□□□□ -2.26
LRRC39-201ENST00000342895 LRP1Q07954 4544 aaKnown RBP0.93□□□□□ -2.26
LRRC39-201ENST00000342895 PRM1P04553 51 aa0.92□□□□□ -2.26
LRRC39-201ENST00000342895 SMR3BP02814 79 aaPredicted RBP0.91□□□□□ -2.26
LRRC39-201ENST00000342895 PKHD1P08F94 4074 aa0.89□□□□□ -2.27
LRRC39-201ENST00000342895 MUC17Q685J3 4493 aa0.88□□□□□ -2.27
LRRC39-201ENST00000342895 FAT1Q14517 4588 aa0.88□□□□□ -2.27
LRRC39-201ENST00000342895 KRTAP19-5Q3LI72 72 aa0.86□□□□□ -2.27
LRRC39-201ENST00000342895 FSIP2Q5CZC0 6907 aa0.86□□□□□ -2.27
LRRC39-201ENST00000342895 SYNE1Q8NF91 8797 aaKnown RBP0.83□□□□□ -2.28
LRRC39-201ENST00000342895 STARD9Q9P2P6 4700 aa0.83□□□□□ -2.28
LRRC39-201ENST00000342895 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
LRRC39-201ENST00000342895 MT1AP04731 61 aa0.8□□□□□ -2.28
LRRC39-201ENST00000342895 KRTAP19-3Q7Z4W3 81 aa0.79□□□□□ -2.28
LRRC39-201ENST00000342895 LRP1BQ9NZR2 4599 aa0.77□□□□□ -2.29
LRRC39-201ENST00000342895 KRTAP6-2Q3LI66 62 aa0.75□□□□□ -2.29
LRRC39-201ENST00000342895 HERC1Q15751 4861 aa0.75□□□□□ -2.29
LRRC39-201ENST00000342895 DSTQ03001 7570 aaKnown RBP0.75□□□□□ -2.29
LRRC39-201ENST00000342895 LRP2P98164 4655 aa0.75□□□□□ -2.29
LRRC39-201ENST00000342895 KMT2DO14686 5537 aa0.74□□□□□ -2.29
LRRC39-201ENST00000342895 SPRR2DP22532 72 aa0.73□□□□□ -2.29
LRRC39-201ENST00000342895 KRTAP5-10Q6L8G5 202 aa0.71□□□□□ -2.3
LRRC39-201ENST00000342895 SPRR2BP35325 72 aa0.71□□□□□ -2.3
LRRC39-201ENST00000342895 SPRR2GQ9BYE4 73 aa0.71□□□□□ -2.3
LRRC39-201ENST00000342895 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
LRRC39-201ENST00000342895 SPRR2FQ96RM1 72 aa0.69□□□□□ -2.3
LRRC39-201ENST00000342895 SPRR2AP35326 72 aa0.69□□□□□ -2.3
LRRC39-201ENST00000342895 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
LRRC39-201ENST00000342895 MT1EP04732 61 aa0.68□□□□□ -2.3
LRRC39-201ENST00000342895 KIAA1109Q2LD37 5005 aa0.68□□□□□ -2.3
LRRC39-201ENST00000342895 PCLOQ9Y6V0 5065 aa0.67□□□□□ -2.3
LRRC39-201ENST00000342895 UBR4Q5T4S7 5183 aa0.66□□□□□ -2.3
LRRC39-201ENST00000342895 SPRR2EP22531 72 aa0.65□□□□□ -2.3
LRRC39-201ENST00000342895 MT1XP80297 61 aa0.65□□□□□ -2.3
LRRC39-201ENST00000342895 MT1LQ93083 61 aa0.65□□□□□ -2.3
LRRC39-201ENST00000342895 MUC2Q02817 5179 aa0.65□□□□□ -2.31
LRRC39-201ENST00000342895 KRTAP19-2Q3LHN2 52 aa0.63□□□□□ -2.31
LRRC39-201ENST00000342895 KRTAP19-8Q3LI54 63 aa0.61□□□□□ -2.31
LRRC39-201ENST00000342895 KRTAP20-1Q3LI63 56 aa0.61□□□□□ -2.31
LRRC39-201ENST00000342895 MT1HP80294 61 aa0.6□□□□□ -2.31
LRRC39-201ENST00000342895 KRTAP19-7Q3SYF9 63 aa0.58□□□□□ -2.32
LRRC39-201ENST00000342895 DNHD1Q96M86 4753 aa0.57□□□□□ -2.32
LRRC39-201ENST00000342895 HERC2O95714 4834 aa0.57□□□□□ -2.32
LRRC39-201ENST00000342895 HMCN2Q8NDA2 5059 aa0.57□□□□□ -2.32
LRRC39-201ENST00000342895 BIRC6Q9NR09 4857 aa0.56□□□□□ -2.32
LRRC39-201ENST00000342895 SSPOA2VEC9 5147 aa0.55□□□□□ -2.32
LRRC39-201ENST00000342895 HYDINQ4G0P3 5121 aa0.55□□□□□ -2.32
LRRC39-201ENST00000342895 MT1BP07438 61 aa0.55□□□□□ -2.32
LRRC39-201ENST00000342895 USH2AO75445 5202 aa0.55□□□□□ -2.32
LRRC39-201ENST00000342895 MT1GP13640 62 aa0.54□□□□□ -2.32
LRRC39-201ENST00000342895 RYR2Q92736 4967 aa0.54□□□□□ -2.32
LRRC39-201ENST00000342895 RYR1P21817 5038 aa0.52□□□□□ -2.33
LRRC39-201ENST00000342895 KMT2CQ8NEZ4 4911 aaKnown RBP0.5□□□□□ -2.33
LRRC39-201ENST00000342895 RYR3Q15413 4870 aa0.5□□□□□ -2.33
LRRC39-201ENST00000342895 KRTAP6-1Q3LI64 71 aa0.5□□□□□ -2.33
LRRC39-201ENST00000342895 RNF213Q63HN8 5207 aa0.5□□□□□ -2.33
LRRC39-201ENST00000342895 EPPK1P58107 5090 aaKnown RBP0.48□□□□□ -2.33
LRRC39-201ENST00000342895 ABCA13Q86UQ4 5058 aa0.47□□□□□ -2.33
LRRC39-201ENST00000342895 FAT4Q6V0I7 4981 aa0.47□□□□□ -2.33
LRRC39-201ENST00000342895 MT1MQ8N339 61 aa0.46□□□□□ -2.34
LRRC39-201ENST00000342895 MT2AP02795 61 aa0.46□□□□□ -2.34
LRRC39-201ENST00000342895 MT1FP04733 61 aa0.44□□□□□ -2.34
LRRC39-201ENST00000342895 MT1HL1P0DM35 61 aa0.42□□□□□ -2.34
LRRC39-201ENST00000342895 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
LRRC39-201ENST00000342895 MUC12Q9UKN1 5478 aa0.29□□□□□ -2.36
LRRC39-201ENST00000342895 KRTAP19-6Q3LI70 58 aa0.15□□□□□ -2.39
LRRC39-201ENST00000342895 MT4P47944 62 aa0.13□□□□□ -2.39
LRRC39-201ENST00000342895 KRTAP20-2Q3LI61 65 aa0.12□□□□□ -2.39
Retrieved 77 of 20,778 RNA–protein pairs in 15.2 ms