RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 KRTAP12-3P60328 96 aa7.96□□□□□ -1.14
RBM38-201ENST00000342690 KRTAP19-3Q7Z4W3 81 aa7.96□□□□□ -1.14
RBM38-201ENST00000342690 KRTAP2-3P0C7H8 128 aa7.94□□□□□ -1.14
RBM38-201ENST00000342690 PP632Q6XCG6 107 aa7.94□□□□□ -1.14
RBM38-201ENST00000342690 KRTAP2-4Q9BYR9 128 aa7.94□□□□□ -1.14
RBM38-201ENST00000342690 PMAIP1Q13794 54 aa7.92□□□□□ -1.14
RBM38-201ENST00000342690 LCE5AQ5TCM9 118 aa7.91□□□□□ -1.14
RBM38-201ENST00000342690 PRO0628Q9UI54 55 aa7.86□□□□□ -1.15
RBM38-201ENST00000342690 MT1LQ93083 61 aa7.84□□□□□ -1.15
RBM38-201ENST00000342690 MT1GP13640 62 aa7.8□□□□□ -1.16
RBM38-201ENST00000342690 LCE3BQ5TA77 95 aa7.77□□□□□ -1.17
RBM38-201ENST00000342690 KRTAP2-2Q9BYT5 123 aa7.72□□□□□ -1.17
RBM38-201ENST00000342690 KRTAP2-1Q9BYU5 128 aa7.72□□□□□ -1.17
RBM38-201ENST00000342690 MT1MQ8N339 61 aa7.71□□□□□ -1.18
RBM38-201ENST00000342690 KRTAP15-1Q3LI76 137 aa7.65□□□□□ -1.18
RBM38-201ENST00000342690 KRTAP19-4Q3LI73 84 aa7.57□□□□□ -1.2
RBM38-201ENST00000342690 KRTAP4-3Q9BYR4 195 aa7.52□□□□□ -1.21
RBM38-201ENST00000342690 DSTQ03001 7570 aaKnown RBP7.51□□□□□ -1.21
RBM38-201ENST00000342690 KRTAP4-7Q9BYR0 210 aa7.49□□□□□ -1.21
RBM38-201ENST00000342690 PRAC1Q96KF2 57 aa7.45□□□□□ -1.22
RBM38-201ENST00000342690 LCE3CQ5T5A8 94 aa7.39□□□□□ -1.23
RBM38-201ENST00000342690 KTN1-AS1Q86SY8 53 aa7.39□□□□□ -1.23
RBM38-201ENST00000342690 GPR98Q8WXG9 6306 aa7.19□□□□□ -1.26
RBM38-201ENST00000342690 LCE4AQ5TA78 99 aa7.12□□□□□ -1.27
RBM38-201ENST00000342690 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
RBM38-201ENST00000342690 KRTAP5-4Q6L8H1 288 aa7.08□□□□□ -1.28
RBM38-201ENST00000342690 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
RBM38-201ENST00000342690 SVIPQ8NHG7 77 aa7.04□□□□□ -1.28
RBM38-201ENST00000342690 LCE1DQ5T752 114 aa7.02□□□□□ -1.29
RBM38-201ENST00000342690 KRTAP5-5Q701N2 237 aaPredicted RBP7.02□□□□□ -1.29
RBM38-201ENST00000342690 MT4P47944 62 aa6.99□□□□□ -1.29
RBM38-201ENST00000342690 KRTAP9-6A8MVA2 160 aa6.9□□□□□ -1.3
RBM38-201ENST00000342690 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
RBM38-201ENST00000342690 HMCN1Q96RW7 5635 aa6.81□□□□□ -1.32
RBM38-201ENST00000342690 SPRR5A0A1B0GTR4 108 aa6.71□□□□□ -1.34
RBM38-201ENST00000342690 KRTAP12-4P60329 112 aa6.69□□□□□ -1.34
RBM38-201ENST00000342690 MT1AP04731 61 aa6.68□□□□□ -1.34
RBM38-201ENST00000342690 SYNE1Q8NF91 8797 aaKnown RBP6.68□□□□□ -1.34
RBM38-201ENST00000342690 KRTAP20-2Q3LI61 65 aa6.66□□□□□ -1.34
RBM38-201ENST00000342690 KRTAP6-1Q3LI64 71 aa6.62□□□□□ -1.35
RBM38-201ENST00000342690 AHNAK2Q8IVF2 5795 aa6.51□□□□□ -1.37
RBM38-201ENST00000342690 KRTAP5-3Q6L8H2 238 aa6.45□□□□□ -1.38
RBM38-201ENST00000342690 KRTAP5-10Q6L8G5 202 aa6.41□□□□□ -1.38
RBM38-201ENST00000342690 KRTAP9-4Q9BYQ2 154 aa6.39□□□□□ -1.39
RBM38-201ENST00000342690 KRTAP5-2Q701N4 177 aa6.29□□□□□ -1.4
RBM38-201ENST00000342690 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
RBM38-201ENST00000342690 KRTAP6-2Q3LI66 62 aa6.22□□□□□ -1.41
RBM38-201ENST00000342690 KRTAP5-7Q6L8G8 165 aa6.19□□□□□ -1.42
RBM38-201ENST00000342690 MT3P25713 68 aa6.09□□□□□ -1.43
RBM38-201ENST00000342690 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
RBM38-201ENST00000342690 KRTAP5-8O75690 187 aa5.76□□□□□ -1.49
RBM38-201ENST00000342690 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
RBM38-201ENST00000342690 NDUFAF8A1L188 74 aa5.6□□□□□ -1.51
RBM38-201ENST00000342690 KRTAP5-1Q6L8H4 278 aa5.56□□□□□ -1.52
RBM38-201ENST00000342690 AHNAKQ09666 5890 aaKnown RBP5.49□□□□□ -1.53
RBM38-201ENST00000342690 LCE3DQ9BYE3 92 aa5.46□□□□□ -1.54
RBM38-201ENST00000342690 MUC5BQ9HC84 5762 aaPredicted RBP5.46□□□□□ -1.54
RBM38-201ENST00000342690 LCE1EQ5T753 118 aa5.45□□□□□ -1.54
RBM38-201ENST00000342690 MUC5ACP98088 5654 aa5.43□□□□□ -1.54
RBM38-201ENST00000342690 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
RBM38-201ENST00000342690 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
RBM38-201ENST00000342690 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
RBM38-201ENST00000342690 LCE1BQ5T7P3 118 aa5.12□□□□□ -1.59
RBM38-201ENST00000342690 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
RBM38-201ENST00000342690 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
RBM38-201ENST00000342690 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
RBM38-201ENST00000342690 INE1O15225 51 aa4.63□□□□□ -1.67
RBM38-201ENST00000342690 KRTAP5-11Q6L8G4 156 aa4.56□□□□□ -1.68
RBM38-201ENST00000342690 KRTAP4-12Q9BQ66 201 aa4.5□□□□□ -1.69
RBM38-201ENST00000342690 KRTAP21-2Q3LI59 83 aa4.35□□□□□ -1.71
RBM38-201ENST00000342690 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
RBM38-201ENST00000342690 PRM1P04553 51 aa4.27□□□□□ -1.73
RBM38-201ENST00000342690 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
RBM38-201ENST00000342690 PHGR1C9JFL3 82 aa3.92□□□□□ -1.78
RBM38-201ENST00000342690 H3BS24 57 aa3.89□□□□□ -1.79
RBM38-201ENST00000342690 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
RBM38-201ENST00000342690 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
RBM38-201ENST00000342690 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms