RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 KRTAP20-1Q3LI63 56 aa2.59□□□□□ -1.99
FCF1-201ENST00000341162 FSIP2Q5CZC0 6907 aa2.58□□□□□ -2
FCF1-201ENST00000341162 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
FCF1-201ENST00000341162 SYNE2Q8WXH0 6885 aaKnown RBP2.57□□□□□ -2
FCF1-201ENST00000341162 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
FCF1-201ENST00000341162 MT1EP04732 61 aa2.54□□□□□ -2
FCF1-201ENST00000341162 SPRR2EP22531 72 aa2.52□□□□□ -2.01
FCF1-201ENST00000341162 SPRR2BP35325 72 aa2.52□□□□□ -2.01
FCF1-201ENST00000341162 SPRR2AP35326 72 aa2.52□□□□□ -2.01
FCF1-201ENST00000341162 MT1LQ93083 61 aa2.52□□□□□ -2.01
FCF1-201ENST00000341162 KRTAP2-3P0C7H8 128 aa2.51□□□□□ -2.01
FCF1-201ENST00000341162 KRTAP2-4Q9BYR9 128 aa2.51□□□□□ -2.01
FCF1-201ENST00000341162 SPRR2DP22532 72 aa2.5□□□□□ -2.01
FCF1-201ENST00000341162 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.5□□□□□ -2.01
FCF1-201ENST00000341162 SPRR2FQ96RM1 72 aa2.5□□□□□ -2.01
FCF1-201ENST00000341162 LCE5AQ5TCM9 118 aa2.47□□□□□ -2.01
FCF1-201ENST00000341162 KRTAP2-1Q9BYU5 128 aa2.47□□□□□ -2.01
FCF1-201ENST00000341162 MT1GP13640 62 aa2.44□□□□□ -2.02
FCF1-201ENST00000341162 KRTAP4-8A0A0G2JLE6 195 aa2.44□□□□□ -2.02
FCF1-201ENST00000341162 KRTAP4-8Q9BYQ9 185 aa2.44□□□□□ -2.02
FCF1-201ENST00000341162 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
FCF1-201ENST00000341162 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
FCF1-201ENST00000341162 LCE1AQ5T7P2 110 aa2.4□□□□□ -2.02
FCF1-201ENST00000341162 KRTAP5-9P26371 169 aa2.39□□□□□ -2.03
FCF1-201ENST00000341162 KRTAP2-2Q9BYT5 123 aa2.39□□□□□ -2.03
FCF1-201ENST00000341162 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
FCF1-201ENST00000341162 LCE3BQ5TA77 95 aa2.38□□□□□ -2.03
FCF1-201ENST00000341162 MT1MQ8N339 61 aa2.37□□□□□ -2.03
FCF1-201ENST00000341162 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
FCF1-201ENST00000341162 NEBP20929 6669 aa2.34□□□□□ -2.03
FCF1-201ENST00000341162 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
FCF1-201ENST00000341162 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
FCF1-201ENST00000341162 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
FCF1-201ENST00000341162 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
FCF1-201ENST00000341162 KRTAP4-7Q9BYR0 210 aa2.27□□□□□ -2.05
FCF1-201ENST00000341162 KMT2DO14686 5537 aa2.23□□□□□ -2.05
FCF1-201ENST00000341162 MT1AP04731 61 aa2.23□□□□□ -2.05
FCF1-201ENST00000341162 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
FCF1-201ENST00000341162 SYNE1Q8NF91 8797 aaKnown RBP2.22□□□□□ -2.05
FCF1-201ENST00000341162 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
FCF1-201ENST00000341162 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
FCF1-201ENST00000341162 LCE1DQ5T752 114 aa2.18□□□□□ -2.06
FCF1-201ENST00000341162 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
FCF1-201ENST00000341162 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.07
FCF1-201ENST00000341162 KRTAP4-9Q9BYQ8 210 aa2.14□□□□□ -2.07
FCF1-201ENST00000341162 KRTAP4-3Q9BYR4 195 aa2.13□□□□□ -2.07
FCF1-201ENST00000341162 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
FCF1-201ENST00000341162 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
FCF1-201ENST00000341162 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
FCF1-201ENST00000341162 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
FCF1-201ENST00000341162 KRTAP4-11Q9BYQ6 195 aa2.04□□□□□ -2.08
FCF1-201ENST00000341162 MDN1Q9NU22 5596 aa2.03□□□□□ -2.08
FCF1-201ENST00000341162 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
FCF1-201ENST00000341162 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
FCF1-201ENST00000341162 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
FCF1-201ENST00000341162 MT3P25713 68 aa1.98□□□□□ -2.09
FCF1-201ENST00000341162 MT4P47944 62 aa1.97□□□□□ -2.09
FCF1-201ENST00000341162 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
FCF1-201ENST00000341162 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
FCF1-201ENST00000341162 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
FCF1-201ENST00000341162 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.12
FCF1-201ENST00000341162 KRTAP20-2Q3LI61 65 aa1.8□□□□□ -2.12
FCF1-201ENST00000341162 LCE1EQ5T753 118 aa1.77□□□□□ -2.13
FCF1-201ENST00000341162 MUC5ACP98088 5654 aa1.76□□□□□ -2.13
FCF1-201ENST00000341162 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
FCF1-201ENST00000341162 PRM1P04553 51 aa1.72□□□□□ -2.13
FCF1-201ENST00000341162 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
FCF1-201ENST00000341162 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
FCF1-201ENST00000341162 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
FCF1-201ENST00000341162 LCE1CQ5T751 118 aa1.61□□□□□ -2.15
FCF1-201ENST00000341162 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.16
FCF1-201ENST00000341162 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.18
FCF1-201ENST00000341162 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
FCF1-201ENST00000341162 KRTAP4-4Q9BYR3 166 aa1.39□□□□□ -2.19
FCF1-201ENST00000341162 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
FCF1-201ENST00000341162 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
FCF1-201ENST00000341162 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 126 ms