RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 MDN1Q9NU22 5596 aa6.48□□□□□ -1.37
CLDN4-201ENST00000340958 SPRR2FQ96RM1 72 aa6.46□□□□□ -1.38
CLDN4-201ENST00000340958 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
CLDN4-201ENST00000340958 A0A0A0MQY5 61 aa6.39□□□□□ -1.39
CLDN4-201ENST00000340958 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
CLDN4-201ENST00000340958 SPRR2EP22531 72 aa6.3□□□□□ -1.4
CLDN4-201ENST00000340958 SPRR2BP35325 72 aa6.3□□□□□ -1.4
CLDN4-201ENST00000340958 SPRR2AP35326 72 aa6.3□□□□□ -1.4
CLDN4-201ENST00000340958 MT1EP04732 61 aa6.29□□□□□ -1.4
CLDN4-201ENST00000340958 LCE1AQ5T7P2 110 aa6.25□□□□□ -1.41
CLDN4-201ENST00000340958 KRTAP20-1Q3LI63 56 aa6.2□□□□□ -1.42
CLDN4-201ENST00000340958 MT1LQ93083 61 aa6.15□□□□□ -1.42
CLDN4-201ENST00000340958 KRTAP2-3P0C7H8 128 aa6.09□□□□□ -1.44
CLDN4-201ENST00000340958 SPRR2DP22532 72 aa6.09□□□□□ -1.44
CLDN4-201ENST00000340958 KRTAP2-4Q9BYR9 128 aa6.09□□□□□ -1.44
CLDN4-201ENST00000340958 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
CLDN4-201ENST00000340958 KRTAP19-3Q7Z4W3 81 aa6.08□□□□□ -1.44
CLDN4-201ENST00000340958 KRTAP19-4Q3LI73 84 aa6.06□□□□□ -1.44
CLDN4-201ENST00000340958 MT1GP13640 62 aa6.02□□□□□ -1.45
CLDN4-201ENST00000340958 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
CLDN4-201ENST00000340958 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
CLDN4-201ENST00000340958 MT1MQ8N339 61 aa5.93□□□□□ -1.46
CLDN4-201ENST00000340958 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
CLDN4-201ENST00000340958 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.46
CLDN4-201ENST00000340958 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.46
CLDN4-201ENST00000340958 INE1O15225 51 aa5.84□□□□□ -1.47
CLDN4-201ENST00000340958 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
CLDN4-201ENST00000340958 DSTQ03001 7570 aaKnown RBP5.8□□□□□ -1.48
CLDN4-201ENST00000340958 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
CLDN4-201ENST00000340958 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
CLDN4-201ENST00000340958 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
CLDN4-201ENST00000340958 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
CLDN4-201ENST00000340958 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
CLDN4-201ENST00000340958 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
CLDN4-201ENST00000340958 MT4P47944 62 aa5.32□□□□□ -1.56
CLDN4-201ENST00000340958 KRTAP5-5Q701N2 237 aaPredicted RBP5.3□□□□□ -1.56
CLDN4-201ENST00000340958 HMCN1Q96RW7 5635 aa5.29□□□□□ -1.56
CLDN4-201ENST00000340958 MT1AP04731 61 aa5.23□□□□□ -1.57
CLDN4-201ENST00000340958 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
CLDN4-201ENST00000340958 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
CLDN4-201ENST00000340958 GPR98Q8WXG9 6306 aa5.11□□□□□ -1.59
CLDN4-201ENST00000340958 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
CLDN4-201ENST00000340958 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
CLDN4-201ENST00000340958 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
CLDN4-201ENST00000340958 AHNAK2Q8IVF2 5795 aa5.01□□□□□ -1.61
CLDN4-201ENST00000340958 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
CLDN4-201ENST00000340958 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
CLDN4-201ENST00000340958 KRTAP5-10Q6L8G5 202 aa4.86□□□□□ -1.63
CLDN4-201ENST00000340958 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
CLDN4-201ENST00000340958 MT3P25713 68 aa4.79□□□□□ -1.64
CLDN4-201ENST00000340958 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
CLDN4-201ENST00000340958 KRTAP5-7Q6L8G8 165 aa4.62□□□□□ -1.67
CLDN4-201ENST00000340958 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
CLDN4-201ENST00000340958 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
CLDN4-201ENST00000340958 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
CLDN4-201ENST00000340958 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
CLDN4-201ENST00000340958 KRTAP5-8O75690 187 aa4.38□□□□□ -1.71
CLDN4-201ENST00000340958 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
CLDN4-201ENST00000340958 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
CLDN4-201ENST00000340958 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
CLDN4-201ENST00000340958 MUC5BQ9HC84 5762 aaPredicted RBP4.1□□□□□ -1.75
CLDN4-201ENST00000340958 PRM1P04553 51 aa4.09□□□□□ -1.75
CLDN4-201ENST00000340958 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.75
CLDN4-201ENST00000340958 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
CLDN4-201ENST00000340958 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
CLDN4-201ENST00000340958 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
CLDN4-201ENST00000340958 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
CLDN4-201ENST00000340958 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
CLDN4-201ENST00000340958 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
CLDN4-201ENST00000340958 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
CLDN4-201ENST00000340958 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
CLDN4-201ENST00000340958 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
CLDN4-201ENST00000340958 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
CLDN4-201ENST00000340958 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
CLDN4-201ENST00000340958 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
CLDN4-201ENST00000340958 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
CLDN4-201ENST00000340958 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 33.2 ms