RNA–Protein interactions for RNA: ENST00000340857.3

H1F0-201, Transcript of H1 histone family member 0, humanhuman

APPRIS P1 BASIC

Gene H1F0, Length 2,344 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H1F0-201ENST00000340857 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
H1F0-201ENST00000340857 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
H1F0-201ENST00000340857 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
H1F0-201ENST00000340857 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
H1F0-201ENST00000340857 KRTAP9-7A8MTY7 169 aa5.63□□□□□ -1.51
H1F0-201ENST00000340857 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
H1F0-201ENST00000340857 KRTAP2-4Q9BYR9 128 aa5.62□□□□□ -1.51
H1F0-201ENST00000340857 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
H1F0-201ENST00000340857 MT1LQ93083 61 aa5.61□□□□□ -1.51
H1F0-201ENST00000340857 MT1EP04732 61 aa5.6□□□□□ -1.51
H1F0-201ENST00000340857 KRTAP6-3Q3LI67 103 aa5.6□□□□□ -1.51
H1F0-201ENST00000340857 KRTAP5-9P26371 169 aa5.59□□□□□ -1.51
H1F0-201ENST00000340857 SPRR2FQ96RM1 72 aa5.58□□□□□ -1.52
H1F0-201ENST00000340857 MDN1Q9NU22 5596 aa5.54□□□□□ -1.52
H1F0-201ENST00000340857 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
H1F0-201ENST00000340857 SPRR2EP22531 72 aa5.35□□□□□ -1.55
H1F0-201ENST00000340857 SPRR2BP35325 72 aa5.35□□□□□ -1.55
H1F0-201ENST00000340857 SPRR2AP35326 72 aa5.35□□□□□ -1.55
H1F0-201ENST00000340857 NEBP20929 6669 aa5.33□□□□□ -1.56
H1F0-201ENST00000340857 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
H1F0-201ENST00000340857 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
H1F0-201ENST00000340857 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
H1F0-201ENST00000340857 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
H1F0-201ENST00000340857 MT1GP13640 62 aa5.24□□□□□ -1.57
H1F0-201ENST00000340857 MT1MQ8N339 61 aa5.23□□□□□ -1.57
H1F0-201ENST00000340857 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.58
H1F0-201ENST00000340857 SPRR2DP22532 72 aa5.15□□□□□ -1.59
H1F0-201ENST00000340857 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
H1F0-201ENST00000340857 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
H1F0-201ENST00000340857 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
H1F0-201ENST00000340857 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
H1F0-201ENST00000340857 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
H1F0-201ENST00000340857 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
H1F0-201ENST00000340857 MT1AP04731 61 aa4.76□□□□□ -1.65
H1F0-201ENST00000340857 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.66
H1F0-201ENST00000340857 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
H1F0-201ENST00000340857 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
H1F0-201ENST00000340857 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
H1F0-201ENST00000340857 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
H1F0-201ENST00000340857 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
H1F0-201ENST00000340857 MT4P47944 62 aa4.52□□□□□ -1.69
H1F0-201ENST00000340857 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
H1F0-201ENST00000340857 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
H1F0-201ENST00000340857 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
H1F0-201ENST00000340857 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
H1F0-201ENST00000340857 PRM1P04553 51 aa4.4□□□□□ -1.71
H1F0-201ENST00000340857 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
H1F0-201ENST00000340857 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
H1F0-201ENST00000340857 MT3P25713 68 aa4.26□□□□□ -1.73
H1F0-201ENST00000340857 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
H1F0-201ENST00000340857 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
H1F0-201ENST00000340857 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
H1F0-201ENST00000340857 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
H1F0-201ENST00000340857 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
H1F0-201ENST00000340857 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
H1F0-201ENST00000340857 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
H1F0-201ENST00000340857 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
H1F0-201ENST00000340857 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
H1F0-201ENST00000340857 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
H1F0-201ENST00000340857 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
H1F0-201ENST00000340857 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
H1F0-201ENST00000340857 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
H1F0-201ENST00000340857 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
H1F0-201ENST00000340857 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
H1F0-201ENST00000340857 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
H1F0-201ENST00000340857 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
H1F0-201ENST00000340857 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
H1F0-201ENST00000340857 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
H1F0-201ENST00000340857 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
H1F0-201ENST00000340857 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
H1F0-201ENST00000340857 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
H1F0-201ENST00000340857 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
H1F0-201ENST00000340857 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
H1F0-201ENST00000340857 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
H1F0-201ENST00000340857 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
H1F0-201ENST00000340857 PHGR1C9JFL3 82 aa2.59□□□□□ -2
H1F0-201ENST00000340857 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 71.2 ms