RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 MT4P47944 62 aa5.99□□□□□ -1.45
BRCC3-202ENST00000340647 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
BRCC3-202ENST00000340647 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
BRCC3-202ENST00000340647 LCE4AQ5TA78 99 aa5.96□□□□□ -1.46
BRCC3-202ENST00000340647 KRTAP9-9Q9BYP9 154 aa5.96□□□□□ -1.46
BRCC3-202ENST00000340647 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
BRCC3-202ENST00000340647 KRTAP5-10Q6L8G5 202 aa5.94□□□□□ -1.46
BRCC3-202ENST00000340647 TNP1P09430 55 aa5.93□□□□□ -1.46
BRCC3-202ENST00000340647 LINC01558Q9Y6Z2 57 aa5.9□□□□□ -1.46
BRCC3-202ENST00000340647 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
BRCC3-202ENST00000340647 KRTAP5-4Q6L8H1 288 aa5.87□□□□□ -1.47
BRCC3-202ENST00000340647 ATP5EP56381 51 aaPredicted RBP5.86□□□□□ -1.47
BRCC3-202ENST00000340647 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.47
BRCC3-202ENST00000340647 PRR15LQ9BU68 103 aa5.83□□□□□ -1.48
BRCC3-202ENST00000340647 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
BRCC3-202ENST00000340647 KRTAP5-7Q6L8G8 165 aa5.75□□□□□ -1.49
BRCC3-202ENST00000340647 TMEM258P61165 79 aa5.71□□□□□ -1.5
BRCC3-202ENST00000340647 UQCR11O14957 56 aa5.7□□□□□ -1.5
BRCC3-202ENST00000340647 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
BRCC3-202ENST00000340647 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
BRCC3-202ENST00000340647 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
BRCC3-202ENST00000340647 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
BRCC3-202ENST00000340647 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
BRCC3-202ENST00000340647 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
BRCC3-202ENST00000340647 PSPHP1O15172 72 aa5.46□□□□□ -1.54
BRCC3-202ENST00000340647 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
BRCC3-202ENST00000340647 Q1T7F1 81 aa5.43□□□□□ -1.54
BRCC3-202ENST00000340647 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
BRCC3-202ENST00000340647 KRTAP15-1Q3LI76 137 aa5.36□□□□□ -1.55
BRCC3-202ENST00000340647 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
BRCC3-202ENST00000340647 KRTAP4-2Q9BYR5 136 aa5.36□□□□□ -1.55
BRCC3-202ENST00000340647 V9GYY9 64 aa5.36□□□□□ -1.55
BRCC3-202ENST00000340647 K7ERS5 55 aa5.35□□□□□ -1.55
BRCC3-202ENST00000340647 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
BRCC3-202ENST00000340647 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
BRCC3-202ENST00000340647 A6NED7 52 aa5.2□□□□□ -1.58
BRCC3-202ENST00000340647 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
BRCC3-202ENST00000340647 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
BRCC3-202ENST00000340647 MT1AP04731 61 aa5.15□□□□□ -1.59
BRCC3-202ENST00000340647 KRTAP5-2Q701N4 177 aa5.14□□□□□ -1.59
BRCC3-202ENST00000340647 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
BRCC3-202ENST00000340647 ROMO1P60602 79 aa5.11□□□□□ -1.59
BRCC3-202ENST00000340647 AHNAKQ09666 5890 aaKnown RBP5.05□□□□□ -1.6
BRCC3-202ENST00000340647 RPS28P62857 69 aaKnown RBP5.04□□□□□ -1.6
BRCC3-202ENST00000340647 MUC5ACP98088 5654 aa5.03□□□□□ -1.6
BRCC3-202ENST00000340647 MUC5BQ9HC84 5762 aaPredicted RBP5.02□□□□□ -1.61
BRCC3-202ENST00000340647 KRTAP5-8O75690 187 aa5□□□□□ -1.61
BRCC3-202ENST00000340647 KRTAP6-2Q3LI66 62 aa4.93□□□□□ -1.62
BRCC3-202ENST00000340647 PCP4P48539 62 aa4.84□□□□□ -1.63
BRCC3-202ENST00000340647 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
BRCC3-202ENST00000340647 MT3P25713 68 aa4.66□□□□□ -1.66
BRCC3-202ENST00000340647 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
BRCC3-202ENST00000340647 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
BRCC3-202ENST00000340647 BRK1Q8WUW1 75 aa4.33□□□□□ -1.72
BRCC3-202ENST00000340647 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
BRCC3-202ENST00000340647 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
BRCC3-202ENST00000340647 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
BRCC3-202ENST00000340647 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
BRCC3-202ENST00000340647 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
BRCC3-202ENST00000340647 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
BRCC3-202ENST00000340647 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
BRCC3-202ENST00000340647 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
BRCC3-202ENST00000340647 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
BRCC3-202ENST00000340647 PRO0628Q9UI54 55 aa3.62□□□□□ -1.83
BRCC3-202ENST00000340647 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
BRCC3-202ENST00000340647 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
BRCC3-202ENST00000340647 KTN1-AS1Q86SY8 53 aa3.51□□□□□ -1.85
BRCC3-202ENST00000340647 PHGR1C9JFL3 82 aa3.45□□□□□ -1.86
BRCC3-202ENST00000340647 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
BRCC3-202ENST00000340647 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
BRCC3-202ENST00000340647 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
BRCC3-202ENST00000340647 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
BRCC3-202ENST00000340647 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
BRCC3-202ENST00000340647 PRM1P04553 51 aa2.64□□□□□ -1.99
BRCC3-202ENST00000340647 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
BRCC3-202ENST00000340647 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.08
BRCC3-202ENST00000340647 INE1O15225 51 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms