RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 MT1EP04732 61 aa5.33□□□□□ -1.56
BRAT1-201ENST00000340611 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
BRAT1-201ENST00000340611 MDN1Q9NU22 5596 aa5.29□□□□□ -1.56
BRAT1-201ENST00000340611 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
BRAT1-201ENST00000340611 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
BRAT1-201ENST00000340611 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.27□□□□□ -1.57
BRAT1-201ENST00000340611 MT1LQ93083 61 aa5.23□□□□□ -1.57
BRAT1-201ENST00000340611 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
BRAT1-201ENST00000340611 KRTAP2-3P0C7H8 128 aa5.13□□□□□ -1.59
BRAT1-201ENST00000340611 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
BRAT1-201ENST00000340611 KRTAP2-4Q9BYR9 128 aa5.13□□□□□ -1.59
BRAT1-201ENST00000340611 KRTAP2-1Q9BYU5 128 aa5.13□□□□□ -1.59
BRAT1-201ENST00000340611 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
BRAT1-201ENST00000340611 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
BRAT1-201ENST00000340611 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
BRAT1-201ENST00000340611 MT1MQ8N339 61 aa5.03□□□□□ -1.6
BRAT1-201ENST00000340611 SPRR2EP22531 72 aa5.03□□□□□ -1.6
BRAT1-201ENST00000340611 SPRR2BP35325 72 aa5.03□□□□□ -1.6
BRAT1-201ENST00000340611 SPRR2AP35326 72 aa5.03□□□□□ -1.6
BRAT1-201ENST00000340611 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
BRAT1-201ENST00000340611 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
BRAT1-201ENST00000340611 MT1GP13640 62 aa5.01□□□□□ -1.61
BRAT1-201ENST00000340611 KRTAP9-7A8MTY7 169 aa4.98□□□□□ -1.61
BRAT1-201ENST00000340611 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
BRAT1-201ENST00000340611 KRTAP12-4P60329 112 aa4.94□□□□□ -1.62
BRAT1-201ENST00000340611 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
BRAT1-201ENST00000340611 SPRR2DP22532 72 aa4.82□□□□□ -1.64
BRAT1-201ENST00000340611 NEBP20929 6669 aa4.8□□□□□ -1.64
BRAT1-201ENST00000340611 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
BRAT1-201ENST00000340611 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
BRAT1-201ENST00000340611 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
BRAT1-201ENST00000340611 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
BRAT1-201ENST00000340611 PRM1P04553 51 aa4.49□□□□□ -1.69
BRAT1-201ENST00000340611 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
BRAT1-201ENST00000340611 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
BRAT1-201ENST00000340611 MT1AP04731 61 aa4.38□□□□□ -1.71
BRAT1-201ENST00000340611 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
BRAT1-201ENST00000340611 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
BRAT1-201ENST00000340611 MT4P47944 62 aa4.31□□□□□ -1.72
BRAT1-201ENST00000340611 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
BRAT1-201ENST00000340611 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
BRAT1-201ENST00000340611 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
BRAT1-201ENST00000340611 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
BRAT1-201ENST00000340611 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
BRAT1-201ENST00000340611 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
BRAT1-201ENST00000340611 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
BRAT1-201ENST00000340611 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
BRAT1-201ENST00000340611 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
BRAT1-201ENST00000340611 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
BRAT1-201ENST00000340611 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
BRAT1-201ENST00000340611 MT3P25713 68 aa3.95□□□□□ -1.78
BRAT1-201ENST00000340611 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
BRAT1-201ENST00000340611 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
BRAT1-201ENST00000340611 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
BRAT1-201ENST00000340611 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
BRAT1-201ENST00000340611 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
BRAT1-201ENST00000340611 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
BRAT1-201ENST00000340611 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.86
BRAT1-201ENST00000340611 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
BRAT1-201ENST00000340611 KRTAP5-10Q6L8G5 202 aa3.39□□□□□ -1.87
BRAT1-201ENST00000340611 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
BRAT1-201ENST00000340611 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
BRAT1-201ENST00000340611 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
BRAT1-201ENST00000340611 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
BRAT1-201ENST00000340611 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
BRAT1-201ENST00000340611 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
BRAT1-201ENST00000340611 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
BRAT1-201ENST00000340611 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
BRAT1-201ENST00000340611 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
BRAT1-201ENST00000340611 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
BRAT1-201ENST00000340611 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
BRAT1-201ENST00000340611 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
BRAT1-201ENST00000340611 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
BRAT1-201ENST00000340611 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
BRAT1-201ENST00000340611 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
BRAT1-201ENST00000340611 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
BRAT1-201ENST00000340611 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms