RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
UPK3BL1-201ENST00000340457 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
UPK3BL1-201ENST00000340457 ROMO1P60602 79 aa5.23□□□□□ -1.57
UPK3BL1-201ENST00000340457 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
UPK3BL1-201ENST00000340457 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
UPK3BL1-201ENST00000340457 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
UPK3BL1-201ENST00000340457 KRTAP19-3Q7Z4W3 81 aa5.17□□□□□ -1.58
UPK3BL1-201ENST00000340457 MT1EP04732 61 aa5.16□□□□□ -1.58
UPK3BL1-201ENST00000340457 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
UPK3BL1-201ENST00000340457 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.58
UPK3BL1-201ENST00000340457 TNP1P09430 55 aa5.12□□□□□ -1.59
UPK3BL1-201ENST00000340457 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
UPK3BL1-201ENST00000340457 AHNAK2Q8IVF2 5795 aa5.11□□□□□ -1.59
UPK3BL1-201ENST00000340457 MT4P47944 62 aa5.1□□□□□ -1.59
UPK3BL1-201ENST00000340457 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
UPK3BL1-201ENST00000340457 KTN1-AS1Q86SY8 53 aa5.08□□□□□ -1.6
UPK3BL1-201ENST00000340457 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
UPK3BL1-201ENST00000340457 MT1GP13640 62 aa4.98□□□□□ -1.61
UPK3BL1-201ENST00000340457 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
UPK3BL1-201ENST00000340457 KRTAP5-10Q6L8G5 202 aa4.96□□□□□ -1.62
UPK3BL1-201ENST00000340457 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
UPK3BL1-201ENST00000340457 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
UPK3BL1-201ENST00000340457 MT1MQ8N339 61 aa4.94□□□□□ -1.62
UPK3BL1-201ENST00000340457 PRAC1Q96KF2 57 aa4.92□□□□□ -1.62
UPK3BL1-201ENST00000340457 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.63
UPK3BL1-201ENST00000340457 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
UPK3BL1-201ENST00000340457 MT1LQ93083 61 aa4.87□□□□□ -1.63
UPK3BL1-201ENST00000340457 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
UPK3BL1-201ENST00000340457 KRTAP5-7Q6L8G8 165 aa4.79□□□□□ -1.64
UPK3BL1-201ENST00000340457 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
UPK3BL1-201ENST00000340457 KRTAP12-3P60328 96 aa4.69□□□□□ -1.66
UPK3BL1-201ENST00000340457 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
UPK3BL1-201ENST00000340457 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
UPK3BL1-201ENST00000340457 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.67
UPK3BL1-201ENST00000340457 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
UPK3BL1-201ENST00000340457 KRTAP5-5Q701N2 237 aaPredicted RBP4.53□□□□□ -1.68
UPK3BL1-201ENST00000340457 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
UPK3BL1-201ENST00000340457 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
UPK3BL1-201ENST00000340457 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
UPK3BL1-201ENST00000340457 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
UPK3BL1-201ENST00000340457 SYNE1Q8NF91 8797 aaKnown RBP4.46□□□□□ -1.7
UPK3BL1-201ENST00000340457 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
UPK3BL1-201ENST00000340457 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
UPK3BL1-201ENST00000340457 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
UPK3BL1-201ENST00000340457 AHNAKQ09666 5890 aaKnown RBP4.29□□□□□ -1.72
UPK3BL1-201ENST00000340457 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
UPK3BL1-201ENST00000340457 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
UPK3BL1-201ENST00000340457 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
UPK3BL1-201ENST00000340457 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
UPK3BL1-201ENST00000340457 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
UPK3BL1-201ENST00000340457 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
UPK3BL1-201ENST00000340457 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
UPK3BL1-201ENST00000340457 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
UPK3BL1-201ENST00000340457 MT1AP04731 61 aa4.12□□□□□ -1.75
UPK3BL1-201ENST00000340457 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
UPK3BL1-201ENST00000340457 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
UPK3BL1-201ENST00000340457 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
UPK3BL1-201ENST00000340457 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
UPK3BL1-201ENST00000340457 MT3P25713 68 aa3.77□□□□□ -1.81
UPK3BL1-201ENST00000340457 H3BS24 57 aa3.54□□□□□ -1.84
UPK3BL1-201ENST00000340457 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
UPK3BL1-201ENST00000340457 A0A0A0MQY5 61 aa3.46□□□□□ -1.85
UPK3BL1-201ENST00000340457 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
UPK3BL1-201ENST00000340457 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
UPK3BL1-201ENST00000340457 INE1O15225 51 aa3.27□□□□□ -1.89
UPK3BL1-201ENST00000340457 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
UPK3BL1-201ENST00000340457 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
UPK3BL1-201ENST00000340457 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
UPK3BL1-201ENST00000340457 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
UPK3BL1-201ENST00000340457 LCE1FQ5T754 118 aa2.96□□□□□ -1.93
UPK3BL1-201ENST00000340457 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
UPK3BL1-201ENST00000340457 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
UPK3BL1-201ENST00000340457 PRM1P04553 51 aa2.7□□□□□ -1.98
UPK3BL1-201ENST00000340457 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
UPK3BL1-201ENST00000340457 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
UPK3BL1-201ENST00000340457 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
UPK3BL1-201ENST00000340457 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 172.9 ms