RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
CSRP1-201ENST00000340006 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
CSRP1-201ENST00000340006 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
CSRP1-201ENST00000340006 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
CSRP1-201ENST00000340006 MT1EP04732 61 aa5.4□□□□□ -1.55
CSRP1-201ENST00000340006 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
CSRP1-201ENST00000340006 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
CSRP1-201ENST00000340006 SPRR5A0A1B0GTR4 108 aa5.36□□□□□ -1.55
CSRP1-201ENST00000340006 SPRR2EP22531 72 aa5.36□□□□□ -1.55
CSRP1-201ENST00000340006 SPRR2BP35325 72 aa5.36□□□□□ -1.55
CSRP1-201ENST00000340006 SPRR2AP35326 72 aa5.36□□□□□ -1.55
CSRP1-201ENST00000340006 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
CSRP1-201ENST00000340006 INE1O15225 51 aa5.28□□□□□ -1.56
CSRP1-201ENST00000340006 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
CSRP1-201ENST00000340006 KRTAP9-9Q9BYP9 154 aa5.25□□□□□ -1.57
CSRP1-201ENST00000340006 NEBP20929 6669 aa5.25□□□□□ -1.57
CSRP1-201ENST00000340006 MT1LQ93083 61 aa5.25□□□□□ -1.57
CSRP1-201ENST00000340006 MT1GP13640 62 aa5.22□□□□□ -1.57
CSRP1-201ENST00000340006 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
CSRP1-201ENST00000340006 SPRR2DP22532 72 aa5.17□□□□□ -1.58
CSRP1-201ENST00000340006 MT1MQ8N339 61 aa5.11□□□□□ -1.59
CSRP1-201ENST00000340006 KRTAP4-7Q9BYR0 210 aa5.07□□□□□ -1.6
CSRP1-201ENST00000340006 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
CSRP1-201ENST00000340006 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
CSRP1-201ENST00000340006 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
CSRP1-201ENST00000340006 KRTAP2-3P0C7H8 128 aa4.98□□□□□ -1.61
CSRP1-201ENST00000340006 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
CSRP1-201ENST00000340006 KRTAP2-4Q9BYR9 128 aa4.98□□□□□ -1.61
CSRP1-201ENST00000340006 KRTAP20-1Q3LI63 56 aa4.97□□□□□ -1.61
CSRP1-201ENST00000340006 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
CSRP1-201ENST00000340006 KRTAP2-1Q9BYU5 128 aa4.86□□□□□ -1.63
CSRP1-201ENST00000340006 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
CSRP1-201ENST00000340006 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
CSRP1-201ENST00000340006 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
CSRP1-201ENST00000340006 MT3P25713 68 aa4.71□□□□□ -1.66
CSRP1-201ENST00000340006 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
CSRP1-201ENST00000340006 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
CSRP1-201ENST00000340006 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
CSRP1-201ENST00000340006 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
CSRP1-201ENST00000340006 MT4P47944 62 aa4.51□□□□□ -1.69
CSRP1-201ENST00000340006 MT1AP04731 61 aa4.46□□□□□ -1.7
CSRP1-201ENST00000340006 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
CSRP1-201ENST00000340006 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
CSRP1-201ENST00000340006 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
CSRP1-201ENST00000340006 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
CSRP1-201ENST00000340006 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
CSRP1-201ENST00000340006 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
CSRP1-201ENST00000340006 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
CSRP1-201ENST00000340006 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
CSRP1-201ENST00000340006 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
CSRP1-201ENST00000340006 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
CSRP1-201ENST00000340006 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
CSRP1-201ENST00000340006 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
CSRP1-201ENST00000340006 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
CSRP1-201ENST00000340006 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
CSRP1-201ENST00000340006 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
CSRP1-201ENST00000340006 GPR98Q8WXG9 6306 aa3.83□□□□□ -1.8
CSRP1-201ENST00000340006 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
CSRP1-201ENST00000340006 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
CSRP1-201ENST00000340006 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
CSRP1-201ENST00000340006 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
CSRP1-201ENST00000340006 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
CSRP1-201ENST00000340006 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
CSRP1-201ENST00000340006 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
CSRP1-201ENST00000340006 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
CSRP1-201ENST00000340006 PRM1P04553 51 aa3.4□□□□□ -1.86
CSRP1-201ENST00000340006 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
CSRP1-201ENST00000340006 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
CSRP1-201ENST00000340006 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
CSRP1-201ENST00000340006 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
CSRP1-201ENST00000340006 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
CSRP1-201ENST00000340006 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
CSRP1-201ENST00000340006 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
CSRP1-201ENST00000340006 PHGR1C9JFL3 82 aa2.56□□□□□ -2
CSRP1-201ENST00000340006 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
CSRP1-201ENST00000340006 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CSRP1-201ENST00000340006 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 67.9 ms