RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
LRP1-202ENST00000338962 KRTAP4-8Q9BYQ9 185 aa4.14□□□□□ -1.75
LRP1-202ENST00000338962 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
LRP1-202ENST00000338962 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
LRP1-202ENST00000338962 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
LRP1-202ENST00000338962 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
LRP1-202ENST00000338962 KRTAP19-7Q3SYF9 63 aa4.02□□□□□ -1.77
LRP1-202ENST00000338962 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
LRP1-202ENST00000338962 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
LRP1-202ENST00000338962 MT1EP04732 61 aa3.94□□□□□ -1.78
LRP1-202ENST00000338962 MDN1Q9NU22 5596 aa3.93□□□□□ -1.78
LRP1-202ENST00000338962 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
LRP1-202ENST00000338962 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
LRP1-202ENST00000338962 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
LRP1-202ENST00000338962 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
LRP1-202ENST00000338962 MT1LQ93083 61 aa3.89□□□□□ -1.79
LRP1-202ENST00000338962 SPRR2EP22531 72 aa3.87□□□□□ -1.79
LRP1-202ENST00000338962 SPRR2BP35325 72 aa3.87□□□□□ -1.79
LRP1-202ENST00000338962 SPRR2AP35326 72 aa3.87□□□□□ -1.79
LRP1-202ENST00000338962 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
LRP1-202ENST00000338962 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
LRP1-202ENST00000338962 KRTAP19-3Q7Z4W3 81 aa3.8□□□□□ -1.8
LRP1-202ENST00000338962 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
LRP1-202ENST00000338962 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.81
LRP1-202ENST00000338962 MT1GP13640 62 aa3.76□□□□□ -1.81
LRP1-202ENST00000338962 SPRR2DP22532 72 aa3.73□□□□□ -1.81
LRP1-202ENST00000338962 MT1MQ8N339 61 aa3.69□□□□□ -1.82
LRP1-202ENST00000338962 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
LRP1-202ENST00000338962 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
LRP1-202ENST00000338962 DSTQ03001 7570 aaKnown RBP3.6□□□□□ -1.83
LRP1-202ENST00000338962 LOC100996750A0A140TA64 210 aa3.59□□□□□ -1.84
LRP1-202ENST00000338962 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
LRP1-202ENST00000338962 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
LRP1-202ENST00000338962 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
LRP1-202ENST00000338962 LCE1DQ5T752 114 aa3.36□□□□□ -1.87
LRP1-202ENST00000338962 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
LRP1-202ENST00000338962 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
LRP1-202ENST00000338962 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
LRP1-202ENST00000338962 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
LRP1-202ENST00000338962 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
LRP1-202ENST00000338962 MT1AP04731 61 aa3.29□□□□□ -1.88
LRP1-202ENST00000338962 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
LRP1-202ENST00000338962 MT4P47944 62 aa3.24□□□□□ -1.89
LRP1-202ENST00000338962 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
LRP1-202ENST00000338962 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
LRP1-202ENST00000338962 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.9
LRP1-202ENST00000338962 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
LRP1-202ENST00000338962 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
LRP1-202ENST00000338962 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.9
LRP1-202ENST00000338962 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
LRP1-202ENST00000338962 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
LRP1-202ENST00000338962 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
LRP1-202ENST00000338962 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
LRP1-202ENST00000338962 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
LRP1-202ENST00000338962 MT3P25713 68 aa2.98□□□□□ -1.93
LRP1-202ENST00000338962 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
LRP1-202ENST00000338962 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
LRP1-202ENST00000338962 PRM1P04553 51 aa2.87□□□□□ -1.95
LRP1-202ENST00000338962 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
LRP1-202ENST00000338962 MUC5ACP98088 5654 aa2.84□□□□□ -1.96
LRP1-202ENST00000338962 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
LRP1-202ENST00000338962 KRTAP4-11Q9BYQ6 195 aa2.81□□□□□ -1.96
LRP1-202ENST00000338962 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
LRP1-202ENST00000338962 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
LRP1-202ENST00000338962 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
LRP1-202ENST00000338962 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
LRP1-202ENST00000338962 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
LRP1-202ENST00000338962 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
LRP1-202ENST00000338962 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
LRP1-202ENST00000338962 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
LRP1-202ENST00000338962 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
LRP1-202ENST00000338962 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
LRP1-202ENST00000338962 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
LRP1-202ENST00000338962 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
LRP1-202ENST00000338962 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
LRP1-202ENST00000338962 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
LRP1-202ENST00000338962 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 64.5 ms