RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
HPS1-202ENST00000338546 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
HPS1-202ENST00000338546 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
HPS1-202ENST00000338546 KMT2DO14686 5537 aa5.97□□□□□ -1.45
HPS1-202ENST00000338546 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
HPS1-202ENST00000338546 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
HPS1-202ENST00000338546 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.46
HPS1-202ENST00000338546 LUZP6Q538Z0 58 aa5.9□□□□□ -1.46
HPS1-202ENST00000338546 SYNE2Q8WXH0 6885 aaKnown RBP5.86□□□□□ -1.47
HPS1-202ENST00000338546 MT1EP04732 61 aa5.86□□□□□ -1.47
HPS1-202ENST00000338546 MACF1Q9UPN3 7388 aaKnown RBP5.86□□□□□ -1.47
HPS1-202ENST00000338546 NDUFAF8A1L188 74 aa5.8□□□□□ -1.48
HPS1-202ENST00000338546 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
HPS1-202ENST00000338546 H3BS24 57 aa5.8□□□□□ -1.48
HPS1-202ENST00000338546 KRTAP6-3Q3LI67 103 aa5.78□□□□□ -1.48
HPS1-202ENST00000338546 MT1LQ93083 61 aa5.76□□□□□ -1.49
HPS1-202ENST00000338546 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
HPS1-202ENST00000338546 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
HPS1-202ENST00000338546 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
HPS1-202ENST00000338546 MT1GP13640 62 aa5.6□□□□□ -1.51
HPS1-202ENST00000338546 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.51
HPS1-202ENST00000338546 NEBP20929 6669 aa5.57□□□□□ -1.52
HPS1-202ENST00000338546 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
HPS1-202ENST00000338546 MT1MQ8N339 61 aa5.5□□□□□ -1.53
HPS1-202ENST00000338546 MUC12Q9UKN1 5478 aa5.48□□□□□ -1.53
HPS1-202ENST00000338546 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
HPS1-202ENST00000338546 LCE1AQ5T7P2 110 aa5.35□□□□□ -1.55
HPS1-202ENST00000338546 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
HPS1-202ENST00000338546 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
HPS1-202ENST00000338546 KRTAP4-3Q9BYR4 195 aa5.32□□□□□ -1.56
HPS1-202ENST00000338546 SPRR2EP22531 72 aa5.27□□□□□ -1.57
HPS1-202ENST00000338546 SPRR2BP35325 72 aa5.27□□□□□ -1.57
HPS1-202ENST00000338546 SPRR2AP35326 72 aa5.27□□□□□ -1.57
HPS1-202ENST00000338546 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
HPS1-202ENST00000338546 A0A0A0MQY5 61 aa5.22□□□□□ -1.57
HPS1-202ENST00000338546 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
HPS1-202ENST00000338546 KRTAP2-2Q9BYT5 123 aa5.12□□□□□ -1.59
HPS1-202ENST00000338546 SPRR2DP22532 72 aa5.08□□□□□ -1.6
HPS1-202ENST00000338546 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
HPS1-202ENST00000338546 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
HPS1-202ENST00000338546 MT1AP04731 61 aa4.92□□□□□ -1.62
HPS1-202ENST00000338546 INE1O15225 51 aa4.9□□□□□ -1.63
HPS1-202ENST00000338546 GPR98Q8WXG9 6306 aa4.88□□□□□ -1.63
HPS1-202ENST00000338546 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
HPS1-202ENST00000338546 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
HPS1-202ENST00000338546 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
HPS1-202ENST00000338546 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
HPS1-202ENST00000338546 MT3P25713 68 aa4.47□□□□□ -1.69
HPS1-202ENST00000338546 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
HPS1-202ENST00000338546 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
HPS1-202ENST00000338546 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
HPS1-202ENST00000338546 MT4P47944 62 aa4.36□□□□□ -1.71
HPS1-202ENST00000338546 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.71
HPS1-202ENST00000338546 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
HPS1-202ENST00000338546 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
HPS1-202ENST00000338546 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
HPS1-202ENST00000338546 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
HPS1-202ENST00000338546 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
HPS1-202ENST00000338546 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
HPS1-202ENST00000338546 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
HPS1-202ENST00000338546 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
HPS1-202ENST00000338546 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
HPS1-202ENST00000338546 PRM1P04553 51 aa3.77□□□□□ -1.81
HPS1-202ENST00000338546 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
HPS1-202ENST00000338546 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
HPS1-202ENST00000338546 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.82
HPS1-202ENST00000338546 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
HPS1-202ENST00000338546 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
HPS1-202ENST00000338546 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
HPS1-202ENST00000338546 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
HPS1-202ENST00000338546 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
HPS1-202ENST00000338546 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
HPS1-202ENST00000338546 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
HPS1-202ENST00000338546 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
HPS1-202ENST00000338546 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
HPS1-202ENST00000338546 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
HPS1-202ENST00000338546 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 75.6 ms