RNA–Protein interactions for RNA: ENST00000336777.9

SSX2-201, Transcript of SSX family member 2, humanhuman

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Gene SSX2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2-201ENST00000336777 SMIM26A0A096LP01 95 aa4.02□□□□□ -1.77
SSX2-201ENST00000336777 TMEM258P61165 79 aa4□□□□□ -1.77
SSX2-201ENST00000336777 PRR15LQ9BU68 103 aa3.99□□□□□ -1.77
SSX2-201ENST00000336777 LINC01558Q9Y6Z2 57 aa3.95□□□□□ -1.78
SSX2-201ENST00000336777 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
SSX2-201ENST00000336777 MT1EP04732 61 aa3.92□□□□□ -1.78
SSX2-201ENST00000336777 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
SSX2-201ENST00000336777 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.78
SSX2-201ENST00000336777 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.78
SSX2-201ENST00000336777 MT3P25713 68 aa3.89□□□□□ -1.79
SSX2-201ENST00000336777 C10orf95Q9H7T3 257 aa3.89□□□□□ -1.79
SSX2-201ENST00000336777 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
SSX2-201ENST00000336777 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
SSX2-201ENST00000336777 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
SSX2-201ENST00000336777 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
SSX2-201ENST00000336777 UQCR11O14957 56 aa3.85□□□□□ -1.79
SSX2-201ENST00000336777 TNP1P09430 55 aa3.84□□□□□ -1.79
SSX2-201ENST00000336777 PSPHP1O15172 72 aa3.81□□□□□ -1.8
SSX2-201ENST00000336777 MIR22HGQ0VDD5 57 aa3.79□□□□□ -1.8
SSX2-201ENST00000336777 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
SSX2-201ENST00000336777 MT1LQ93083 61 aa3.76□□□□□ -1.81
SSX2-201ENST00000336777 MT1MQ8N339 61 aa3.73□□□□□ -1.81
SSX2-201ENST00000336777 MT1GP13640 62 aa3.72□□□□□ -1.81
SSX2-201ENST00000336777 V9GYY9 64 aa3.72□□□□□ -1.81
SSX2-201ENST00000336777 RPS28P62857 69 aaKnown RBP3.71□□□□□ -1.82
SSX2-201ENST00000336777 Q1T7F1 81 aa3.71□□□□□ -1.82
SSX2-201ENST00000336777 PP632Q6XCG6 107 aa3.71□□□□□ -1.82
SSX2-201ENST00000336777 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
SSX2-201ENST00000336777 K7ERS5 55 aa3.69□□□□□ -1.82
SSX2-201ENST00000336777 A6NED7 52 aa3.68□□□□□ -1.82
SSX2-201ENST00000336777 KRTAP12-3P60328 96 aa3.67□□□□□ -1.82
SSX2-201ENST00000336777 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
SSX2-201ENST00000336777 MT4P47944 62 aa3.58□□□□□ -1.84
SSX2-201ENST00000336777 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
SSX2-201ENST00000336777 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
SSX2-201ENST00000336777 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
SSX2-201ENST00000336777 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.85
SSX2-201ENST00000336777 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.85
SSX2-201ENST00000336777 ROMO1P60602 79 aa3.47□□□□□ -1.85
SSX2-201ENST00000336777 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
SSX2-201ENST00000336777 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
SSX2-201ENST00000336777 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
SSX2-201ENST00000336777 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
SSX2-201ENST00000336777 BRK1Q8WUW1 75 aa3.36□□□□□ -1.87
SSX2-201ENST00000336777 PRAC1Q96KF2 57 aa3.36□□□□□ -1.87
SSX2-201ENST00000336777 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.88
SSX2-201ENST00000336777 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
SSX2-201ENST00000336777 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
SSX2-201ENST00000336777 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
SSX2-201ENST00000336777 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
SSX2-201ENST00000336777 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
SSX2-201ENST00000336777 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
SSX2-201ENST00000336777 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
SSX2-201ENST00000336777 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
SSX2-201ENST00000336777 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
SSX2-201ENST00000336777 MT1AP04731 61 aa3.18□□□□□ -1.9
SSX2-201ENST00000336777 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
SSX2-201ENST00000336777 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
SSX2-201ENST00000336777 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
SSX2-201ENST00000336777 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
SSX2-201ENST00000336777 KTN1-AS1Q86SY8 53 aa3.02□□□□□ -1.93
SSX2-201ENST00000336777 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
SSX2-201ENST00000336777 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
SSX2-201ENST00000336777 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
SSX2-201ENST00000336777 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
SSX2-201ENST00000336777 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
SSX2-201ENST00000336777 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
SSX2-201ENST00000336777 LCE1CQ5T751 118 aa2.56□□□□□ -2
SSX2-201ENST00000336777 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
SSX2-201ENST00000336777 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
SSX2-201ENST00000336777 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
SSX2-201ENST00000336777 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
SSX2-201ENST00000336777 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
SSX2-201ENST00000336777 INE1O15225 51 aa1.91□□□□□ -2.1
SSX2-201ENST00000336777 PRM1P04553 51 aa1.83□□□□□ -2.12
SSX2-201ENST00000336777 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.18
SSX2-201ENST00000336777 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 9.2 ms