RNA–Protein interactions for RNA: ENST00000336083.7

RAB6A-202, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB6A, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-202ENST00000336083 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
RAB6A-202ENST00000336083 MT1LQ93083 61 aa4.17□□□□□ -1.74
RAB6A-202ENST00000336083 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
RAB6A-202ENST00000336083 MT1EP04732 61 aa4.11□□□□□ -1.75
RAB6A-202ENST00000336083 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
RAB6A-202ENST00000336083 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
RAB6A-202ENST00000336083 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
RAB6A-202ENST00000336083 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
RAB6A-202ENST00000336083 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
RAB6A-202ENST00000336083 MT1GP13640 62 aa4.02□□□□□ -1.77
RAB6A-202ENST00000336083 KRTAP9-6A0A140TA67 174 aa4□□□□□ -1.77
RAB6A-202ENST00000336083 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
RAB6A-202ENST00000336083 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
RAB6A-202ENST00000336083 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
RAB6A-202ENST00000336083 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
RAB6A-202ENST00000336083 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
RAB6A-202ENST00000336083 MT1MQ8N339 61 aa3.84□□□□□ -1.8
RAB6A-202ENST00000336083 LCE3BQ5TA77 95 aa3.82□□□□□ -1.8
RAB6A-202ENST00000336083 KRTAP4-9Q9BYQ8 210 aa3.82□□□□□ -1.8
RAB6A-202ENST00000336083 SPRR2FQ96RM1 72 aa3.8□□□□□ -1.8
RAB6A-202ENST00000336083 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
RAB6A-202ENST00000336083 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
RAB6A-202ENST00000336083 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
RAB6A-202ENST00000336083 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
RAB6A-202ENST00000336083 PRM1P04553 51 aa3.61□□□□□ -1.83
RAB6A-202ENST00000336083 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
RAB6A-202ENST00000336083 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.84
RAB6A-202ENST00000336083 SPRR2EP22531 72 aa3.58□□□□□ -1.84
RAB6A-202ENST00000336083 SPRR2BP35325 72 aa3.58□□□□□ -1.84
RAB6A-202ENST00000336083 SPRR2AP35326 72 aa3.58□□□□□ -1.84
RAB6A-202ENST00000336083 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
RAB6A-202ENST00000336083 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
RAB6A-202ENST00000336083 MT1AP04731 61 aa3.56□□□□□ -1.84
RAB6A-202ENST00000336083 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
RAB6A-202ENST00000336083 NEBP20929 6669 aa3.48□□□□□ -1.85
RAB6A-202ENST00000336083 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
RAB6A-202ENST00000336083 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
RAB6A-202ENST00000336083 SPRR2DP22532 72 aa3.41□□□□□ -1.86
RAB6A-202ENST00000336083 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
RAB6A-202ENST00000336083 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
RAB6A-202ENST00000336083 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
RAB6A-202ENST00000336083 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
RAB6A-202ENST00000336083 MT4P47944 62 aa3.2□□□□□ -1.9
RAB6A-202ENST00000336083 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
RAB6A-202ENST00000336083 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
RAB6A-202ENST00000336083 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
RAB6A-202ENST00000336083 MT3P25713 68 aa3.11□□□□□ -1.91
RAB6A-202ENST00000336083 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.92
RAB6A-202ENST00000336083 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
RAB6A-202ENST00000336083 LCE1DQ5T752 114 aa2.97□□□□□ -1.93
RAB6A-202ENST00000336083 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
RAB6A-202ENST00000336083 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
RAB6A-202ENST00000336083 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
RAB6A-202ENST00000336083 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
RAB6A-202ENST00000336083 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
RAB6A-202ENST00000336083 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
RAB6A-202ENST00000336083 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
RAB6A-202ENST00000336083 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
RAB6A-202ENST00000336083 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
RAB6A-202ENST00000336083 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
RAB6A-202ENST00000336083 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
RAB6A-202ENST00000336083 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
RAB6A-202ENST00000336083 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
RAB6A-202ENST00000336083 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
RAB6A-202ENST00000336083 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
RAB6A-202ENST00000336083 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
RAB6A-202ENST00000336083 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
RAB6A-202ENST00000336083 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
RAB6A-202ENST00000336083 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
RAB6A-202ENST00000336083 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
RAB6A-202ENST00000336083 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
RAB6A-202ENST00000336083 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
RAB6A-202ENST00000336083 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
RAB6A-202ENST00000336083 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.08
RAB6A-202ENST00000336083 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
RAB6A-202ENST00000336083 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
RAB6A-202ENST00000336083 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 80.6 ms