RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
UBE2E2-201ENST00000335798 ROMO1P60602 79 aa7.16□□□□□ -1.26
UBE2E2-201ENST00000335798 BRK1Q8WUW1 75 aa7.13□□□□□ -1.27
UBE2E2-201ENST00000335798 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
UBE2E2-201ENST00000335798 KRTAP19-3Q7Z4W3 81 aa7.02□□□□□ -1.28
UBE2E2-201ENST00000335798 LCE5AQ5TCM9 118 aa7.01□□□□□ -1.29
UBE2E2-201ENST00000335798 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
UBE2E2-201ENST00000335798 SPRR2DP22532 72 aa6.97□□□□□ -1.29
UBE2E2-201ENST00000335798 MT1LQ93083 61 aa6.96□□□□□ -1.3
UBE2E2-201ENST00000335798 KRTAP20-1Q3LI63 56 aa6.91□□□□□ -1.3
UBE2E2-201ENST00000335798 MT1GP13640 62 aa6.9□□□□□ -1.3
UBE2E2-201ENST00000335798 LCE1DQ5T752 114 aa6.88□□□□□ -1.31
UBE2E2-201ENST00000335798 KRTAP2-3P0C7H8 128 aa6.86□□□□□ -1.31
UBE2E2-201ENST00000335798 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
UBE2E2-201ENST00000335798 KRTAP2-4Q9BYR9 128 aa6.86□□□□□ -1.31
UBE2E2-201ENST00000335798 KRTAP4-7Q9BYR0 210 aa6.84□□□□□ -1.31
UBE2E2-201ENST00000335798 MT1MQ8N339 61 aa6.81□□□□□ -1.32
UBE2E2-201ENST00000335798 PMAIP1Q13794 54 aa6.72□□□□□ -1.33
UBE2E2-201ENST00000335798 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
UBE2E2-201ENST00000335798 KRTAP2-2Q9BYT5 123 aa6.68□□□□□ -1.34
UBE2E2-201ENST00000335798 KRTAP2-1Q9BYU5 128 aa6.68□□□□□ -1.34
UBE2E2-201ENST00000335798 DSTQ03001 7570 aaKnown RBP6.67□□□□□ -1.34
UBE2E2-201ENST00000335798 KRTAP4-9Q9BYQ8 210 aa6.67□□□□□ -1.34
UBE2E2-201ENST00000335798 PRO0628Q9UI54 55 aa6.67□□□□□ -1.34
UBE2E2-201ENST00000335798 H3BS24 57 aa6.66□□□□□ -1.34
UBE2E2-201ENST00000335798 LCE4AQ5TA78 99 aa6.64□□□□□ -1.35
UBE2E2-201ENST00000335798 KRTAP4-3Q9BYR4 195 aa6.64□□□□□ -1.35
UBE2E2-201ENST00000335798 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
UBE2E2-201ENST00000335798 KRTAP4-2Q9BYR5 136 aa6.54□□□□□ -1.36
UBE2E2-201ENST00000335798 LCE3CQ5T5A8 94 aa6.5□□□□□ -1.37
UBE2E2-201ENST00000335798 KRTAP4-11Q9BYQ6 195 aa6.43□□□□□ -1.38
UBE2E2-201ENST00000335798 PRAC1Q96KF2 57 aa6.4□□□□□ -1.39
UBE2E2-201ENST00000335798 KTN1-AS1Q86SY8 53 aa6.27□□□□□ -1.41
UBE2E2-201ENST00000335798 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
UBE2E2-201ENST00000335798 KRTAP5-5Q701N2 237 aaPredicted RBP6.25□□□□□ -1.41
UBE2E2-201ENST00000335798 KRTAP9-6A8MVA2 160 aa6.17□□□□□ -1.42
UBE2E2-201ENST00000335798 MT4P47944 62 aa6.06□□□□□ -1.44
UBE2E2-201ENST00000335798 SYNE1Q8NF91 8797 aaKnown RBP5.92□□□□□ -1.46
UBE2E2-201ENST00000335798 MT1AP04731 61 aa5.92□□□□□ -1.46
UBE2E2-201ENST00000335798 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.47
UBE2E2-201ENST00000335798 HMCN1Q96RW7 5635 aa5.9□□□□□ -1.47
UBE2E2-201ENST00000335798 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
UBE2E2-201ENST00000335798 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
UBE2E2-201ENST00000335798 KRTAP6-1Q3LI64 71 aa5.86□□□□□ -1.47
UBE2E2-201ENST00000335798 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
UBE2E2-201ENST00000335798 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
UBE2E2-201ENST00000335798 KRTAP5-2Q701N4 177 aa5.57□□□□□ -1.52
UBE2E2-201ENST00000335798 AHNAK2Q8IVF2 5795 aa5.5□□□□□ -1.53
UBE2E2-201ENST00000335798 KRTAP6-2Q3LI66 62 aa5.49□□□□□ -1.53
UBE2E2-201ENST00000335798 GPR98Q8WXG9 6306 aa5.44□□□□□ -1.54
UBE2E2-201ENST00000335798 KRTAP5-10Q6L8G5 202 aa5.44□□□□□ -1.54
UBE2E2-201ENST00000335798 MT3P25713 68 aa5.36□□□□□ -1.55
UBE2E2-201ENST00000335798 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
UBE2E2-201ENST00000335798 KRTAP5-7Q6L8G8 165 aa5.15□□□□□ -1.59
UBE2E2-201ENST00000335798 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
UBE2E2-201ENST00000335798 KRTAP5-8O75690 187 aa5.04□□□□□ -1.6
UBE2E2-201ENST00000335798 KRTAP5-1Q6L8H4 278 aa4.9□□□□□ -1.63
UBE2E2-201ENST00000335798 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
UBE2E2-201ENST00000335798 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
UBE2E2-201ENST00000335798 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
UBE2E2-201ENST00000335798 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
UBE2E2-201ENST00000335798 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
UBE2E2-201ENST00000335798 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
UBE2E2-201ENST00000335798 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
UBE2E2-201ENST00000335798 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
UBE2E2-201ENST00000335798 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
UBE2E2-201ENST00000335798 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
UBE2E2-201ENST00000335798 AHNAKQ09666 5890 aaKnown RBP4.31□□□□□ -1.72
UBE2E2-201ENST00000335798 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
UBE2E2-201ENST00000335798 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
UBE2E2-201ENST00000335798 INE1O15225 51 aa3.87□□□□□ -1.79
UBE2E2-201ENST00000335798 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
UBE2E2-201ENST00000335798 PRM1P04553 51 aa3.7□□□□□ -1.82
UBE2E2-201ENST00000335798 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
UBE2E2-201ENST00000335798 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
UBE2E2-201ENST00000335798 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
UBE2E2-201ENST00000335798 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.04
UBE2E2-201ENST00000335798 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms