RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
AP1S3-201ENST00000334271 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
AP1S3-201ENST00000334271 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
AP1S3-201ENST00000334271 KRTAP8-1Q8IUC2 63 aa4.06□□□□□ -1.76
AP1S3-201ENST00000334271 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
AP1S3-201ENST00000334271 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
AP1S3-201ENST00000334271 LCE3AQ5TA76 89 aa4.02□□□□□ -1.77
AP1S3-201ENST00000334271 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
AP1S3-201ENST00000334271 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
AP1S3-201ENST00000334271 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
AP1S3-201ENST00000334271 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
AP1S3-201ENST00000334271 KMT2DO14686 5537 aa3.91□□□□□ -1.78
AP1S3-201ENST00000334271 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
AP1S3-201ENST00000334271 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
AP1S3-201ENST00000334271 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.79
AP1S3-201ENST00000334271 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.79
AP1S3-201ENST00000334271 MT3P25713 68 aa3.83□□□□□ -1.8
AP1S3-201ENST00000334271 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
AP1S3-201ENST00000334271 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
AP1S3-201ENST00000334271 MT1EP04732 61 aa3.76□□□□□ -1.81
AP1S3-201ENST00000334271 KRTAP9-7A8MTY7 169 aa3.75□□□□□ -1.81
AP1S3-201ENST00000334271 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
AP1S3-201ENST00000334271 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
AP1S3-201ENST00000334271 MT1LQ93083 61 aa3.69□□□□□ -1.82
AP1S3-201ENST00000334271 MACF1Q9UPN3 7388 aaKnown RBP3.68□□□□□ -1.82
AP1S3-201ENST00000334271 MT1GP13640 62 aa3.66□□□□□ -1.82
AP1S3-201ENST00000334271 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
AP1S3-201ENST00000334271 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
AP1S3-201ENST00000334271 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
AP1S3-201ENST00000334271 MUC12Q9UKN1 5478 aa3.59□□□□□ -1.83
AP1S3-201ENST00000334271 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.84
AP1S3-201ENST00000334271 MT1MQ8N339 61 aa3.54□□□□□ -1.84
AP1S3-201ENST00000334271 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
AP1S3-201ENST00000334271 SPRR2EP22531 72 aa3.46□□□□□ -1.86
AP1S3-201ENST00000334271 SPRR2BP35325 72 aa3.46□□□□□ -1.86
AP1S3-201ENST00000334271 SPRR2AP35326 72 aa3.46□□□□□ -1.86
AP1S3-201ENST00000334271 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
AP1S3-201ENST00000334271 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
AP1S3-201ENST00000334271 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
AP1S3-201ENST00000334271 SPRR2DP22532 72 aa3.35□□□□□ -1.87
AP1S3-201ENST00000334271 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
AP1S3-201ENST00000334271 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
AP1S3-201ENST00000334271 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
AP1S3-201ENST00000334271 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
AP1S3-201ENST00000334271 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
AP1S3-201ENST00000334271 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
AP1S3-201ENST00000334271 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
AP1S3-201ENST00000334271 MT1AP04731 61 aa3.19□□□□□ -1.9
AP1S3-201ENST00000334271 NEBP20929 6669 aa3.18□□□□□ -1.9
AP1S3-201ENST00000334271 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
AP1S3-201ENST00000334271 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
AP1S3-201ENST00000334271 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
AP1S3-201ENST00000334271 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
AP1S3-201ENST00000334271 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
AP1S3-201ENST00000334271 PRM1P04553 51 aa2.9□□□□□ -1.95
AP1S3-201ENST00000334271 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
AP1S3-201ENST00000334271 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
AP1S3-201ENST00000334271 MT4P47944 62 aa2.81□□□□□ -1.96
AP1S3-201ENST00000334271 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
AP1S3-201ENST00000334271 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
AP1S3-201ENST00000334271 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
AP1S3-201ENST00000334271 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
AP1S3-201ENST00000334271 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
AP1S3-201ENST00000334271 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
AP1S3-201ENST00000334271 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
AP1S3-201ENST00000334271 LCE1CQ5T751 118 aa2.53□□□□□ -2
AP1S3-201ENST00000334271 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
AP1S3-201ENST00000334271 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
AP1S3-201ENST00000334271 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
AP1S3-201ENST00000334271 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
AP1S3-201ENST00000334271 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
AP1S3-201ENST00000334271 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
AP1S3-201ENST00000334271 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
AP1S3-201ENST00000334271 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
AP1S3-201ENST00000334271 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
AP1S3-201ENST00000334271 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
AP1S3-201ENST00000334271 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
AP1S3-201ENST00000334271 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 127.2 ms