RNA–Protein interactions for RNA: ENST00000333651.10

HMG20B-202, Transcript of high mobility group 20B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20B, Length 1,596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-202ENST00000333651 MT1EP04732 61 aa8.76□□□□□ -1.01
HMG20B-202ENST00000333651 KRTAP20-1Q3LI63 56 aa8.75□□□□□ -1.01
HMG20B-202ENST00000333651 KRTAP23-1A1A580 65 aa8.72□□□□□ -1.01
HMG20B-202ENST00000333651 PP632Q6XCG6 107 aa8.72□□□□□ -1.01
HMG20B-202ENST00000333651 SPRR2DP22532 72 aa8.71□□□□□ -1.02
HMG20B-202ENST00000333651 KRTAP2-3P0C7H8 128 aa8.66□□□□□ -1.02
HMG20B-202ENST00000333651 KRTAP2-4Q9BYR9 128 aa8.66□□□□□ -1.02
HMG20B-202ENST00000333651 KRTAP19-3Q7Z4W3 81 aa8.61□□□□□ -1.03
HMG20B-202ENST00000333651 LCE5AQ5TCM9 118 aa8.57□□□□□ -1.04
HMG20B-202ENST00000333651 KRTAP12-3P60328 96 aa8.48□□□□□ -1.05
HMG20B-202ENST00000333651 MT1GP13640 62 aa8.48□□□□□ -1.05
HMG20B-202ENST00000333651 MT1LQ93083 61 aa8.45□□□□□ -1.06
HMG20B-202ENST00000333651 LCE3BQ5TA77 95 aa8.44□□□□□ -1.06
HMG20B-202ENST00000333651 KRTAP2-2Q9BYT5 123 aa8.42□□□□□ -1.06
HMG20B-202ENST00000333651 KRTAP2-1Q9BYU5 128 aa8.42□□□□□ -1.06
HMG20B-202ENST00000333651 MT1MQ8N339 61 aa8.31□□□□□ -1.08
HMG20B-202ENST00000333651 DSTQ03001 7570 aaKnown RBP8.23□□□□□ -1.09
HMG20B-202ENST00000333651 KRTAP4-3Q9BYR4 195 aa8.1□□□□□ -1.11
HMG20B-202ENST00000333651 KRTAP15-1Q3LI76 137 aa8.08□□□□□ -1.12
HMG20B-202ENST00000333651 KRTAP4-7Q9BYR0 210 aa8.06□□□□□ -1.12
HMG20B-202ENST00000333651 KRTAP19-4Q3LI73 84 aa8.05□□□□□ -1.12
HMG20B-202ENST00000333651 LCE3CQ5T5A8 94 aa7.85□□□□□ -1.15
HMG20B-202ENST00000333651 SPRR5A0A1B0GTR4 108 aa7.79□□□□□ -1.16
HMG20B-202ENST00000333651 KRTAP4-9Q9BYQ8 210 aa7.73□□□□□ -1.17
HMG20B-202ENST00000333651 LCE4AQ5TA78 99 aa7.72□□□□□ -1.17
HMG20B-202ENST00000333651 KRTAP5-4Q6L8H1 288 aa7.65□□□□□ -1.18
HMG20B-202ENST00000333651 LOC100996750A0A140TA64 210 aa7.62□□□□□ -1.19
HMG20B-202ENST00000333651 MT4P47944 62 aa7.59□□□□□ -1.19
HMG20B-202ENST00000333651 LCE1DQ5T752 114 aa7.59□□□□□ -1.19
HMG20B-202ENST00000333651 LUZP6Q538Z0 58 aa7.56□□□□□ -1.2
HMG20B-202ENST00000333651 KRTAP5-5Q701N2 237 aaPredicted RBP7.56□□□□□ -1.2
HMG20B-202ENST00000333651 NDUFAF8A1L188 74 aa7.43□□□□□ -1.22
HMG20B-202ENST00000333651 KRTAP4-6Q9BYQ5 205 aa7.42□□□□□ -1.22
HMG20B-202ENST00000333651 HMCN1Q96RW7 5635 aa7.38□□□□□ -1.23
HMG20B-202ENST00000333651 KRTAP9-6A8MVA2 160 aa7.37□□□□□ -1.23
HMG20B-202ENST00000333651 KRTAP12-4P60329 112 aa7.31□□□□□ -1.24
HMG20B-202ENST00000333651 MT1AP04731 61 aa7.2□□□□□ -1.26
HMG20B-202ENST00000333651 KRTAP20-2Q3LI61 65 aa7.2□□□□□ -1.26
HMG20B-202ENST00000333651 SYNE1Q8NF91 8797 aaKnown RBP7.12□□□□□ -1.27
HMG20B-202ENST00000333651 KRTAP6-1Q3LI64 71 aa7.12□□□□□ -1.27
HMG20B-202ENST00000333651 GPR98Q8WXG9 6306 aa7□□□□□ -1.29
HMG20B-202ENST00000333651 KRTAP5-3Q6L8H2 238 aa6.96□□□□□ -1.29
HMG20B-202ENST00000333651 KRTAP9-4Q9BYQ2 154 aa6.93□□□□□ -1.3
HMG20B-202ENST00000333651 AHNAK2Q8IVF2 5795 aa6.89□□□□□ -1.31
HMG20B-202ENST00000333651 KRTAP5-10Q6L8G5 202 aa6.81□□□□□ -1.32
HMG20B-202ENST00000333651 H3BS24 57 aa6.78□□□□□ -1.32
HMG20B-202ENST00000333651 KRTAP5-2Q701N4 177 aa6.78□□□□□ -1.32
HMG20B-202ENST00000333651 KRTAP6-2Q3LI66 62 aa6.74□□□□□ -1.33
HMG20B-202ENST00000333651 A0A0A0MQY5 61 aa6.65□□□□□ -1.35
HMG20B-202ENST00000333651 MT3P25713 68 aa6.59□□□□□ -1.35
HMG20B-202ENST00000333651 KRTAP5-7Q6L8G8 165 aa6.48□□□□□ -1.37
HMG20B-202ENST00000333651 KRTAP4-11Q9BYQ6 195 aa6.48□□□□□ -1.37
HMG20B-202ENST00000333651 OBSCNQ5VST9 7968 aa6.28□□□□□ -1.4
HMG20B-202ENST00000333651 INE1O15225 51 aa6.26□□□□□ -1.41
HMG20B-202ENST00000333651 KRTAP5-8O75690 187 aa6.23□□□□□ -1.41
HMG20B-202ENST00000333651 KRTAP5-1Q6L8H4 278 aa6□□□□□ -1.45
HMG20B-202ENST00000333651 LCE1EQ5T753 118 aa5.93□□□□□ -1.46
HMG20B-202ENST00000333651 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
HMG20B-202ENST00000333651 LCE3DQ9BYE3 92 aa5.76□□□□□ -1.49
HMG20B-202ENST00000333651 MUC5ACP98088 5654 aa5.74□□□□□ -1.49
HMG20B-202ENST00000333651 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
HMG20B-202ENST00000333651 LCE3EQ5T5B0 92 aa5.56□□□□□ -1.52
HMG20B-202ENST00000333651 LCE1BQ5T7P3 118 aa5.56□□□□□ -1.52
HMG20B-202ENST00000333651 KRTAP4-2Q9BYR5 136 aa5.54□□□□□ -1.52
HMG20B-202ENST00000333651 AHNAKQ09666 5890 aaKnown RBP5.51□□□□□ -1.53
HMG20B-202ENST00000333651 LCE1CQ5T751 118 aa5.51□□□□□ -1.53
HMG20B-202ENST00000333651 KRTAP4-12Q9BQ66 201 aa5.38□□□□□ -1.55
HMG20B-202ENST00000333651 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.05□□□□□ -1.6
HMG20B-202ENST00000333651 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
HMG20B-202ENST00000333651 PRM1P04553 51 aa4.87□□□□□ -1.63
HMG20B-202ENST00000333651 LCE1FQ5T754 118 aa4.7□□□□□ -1.66
HMG20B-202ENST00000333651 KRTAP21-2Q3LI59 83 aa4.69□□□□□ -1.66
HMG20B-202ENST00000333651 PHGR1C9JFL3 82 aa4.25□□□□□ -1.73
HMG20B-202ENST00000333651 KRTAP4-4Q9BYR3 166 aa4.23□□□□□ -1.73
HMG20B-202ENST00000333651 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
HMG20B-202ENST00000333651 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
HMG20B-202ENST00000333651 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms