RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 TNP1P09430 55 aa6.2□□□□□ -1.42
C11orf88-201ENST00000332814 K7ERS5 55 aa6.19□□□□□ -1.42
C11orf88-201ENST00000332814 SPRR2DP22532 72 aa6.19□□□□□ -1.42
C11orf88-201ENST00000332814 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
C11orf88-201ENST00000332814 KRTAP2-3P0C7H8 128 aa6.16□□□□□ -1.42
C11orf88-201ENST00000332814 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
C11orf88-201ENST00000332814 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
C11orf88-201ENST00000332814 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
C11orf88-201ENST00000332814 A6NED7 52 aa6.09□□□□□ -1.43
C11orf88-201ENST00000332814 MT1EP04732 61 aa6.07□□□□□ -1.44
C11orf88-201ENST00000332814 KRTAP19-5Q3LI72 72 aa6.05□□□□□ -1.44
C11orf88-201ENST00000332814 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
C11orf88-201ENST00000332814 LCE3AQ5TA76 89 aa6.04□□□□□ -1.44
C11orf88-201ENST00000332814 KRTAP19-3Q7Z4W3 81 aa6□□□□□ -1.45
C11orf88-201ENST00000332814 KRTAP2-2Q9BYT5 123 aa5.98□□□□□ -1.45
C11orf88-201ENST00000332814 KRTAP2-1Q9BYU5 128 aa5.98□□□□□ -1.45
C11orf88-201ENST00000332814 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
C11orf88-201ENST00000332814 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
C11orf88-201ENST00000332814 MT1GP13640 62 aa5.89□□□□□ -1.47
C11orf88-201ENST00000332814 MT1LQ93083 61 aa5.84□□□□□ -1.47
C11orf88-201ENST00000332814 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
C11orf88-201ENST00000332814 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
C11orf88-201ENST00000332814 MT1MQ8N339 61 aa5.77□□□□□ -1.49
C11orf88-201ENST00000332814 ROMO1P60602 79 aa5.73□□□□□ -1.49
C11orf88-201ENST00000332814 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
C11orf88-201ENST00000332814 DSTQ03001 7570 aaKnown RBP5.65□□□□□ -1.5
C11orf88-201ENST00000332814 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
C11orf88-201ENST00000332814 BRK1Q8WUW1 75 aa5.47□□□□□ -1.53
C11orf88-201ENST00000332814 MT4P47944 62 aa5.38□□□□□ -1.55
C11orf88-201ENST00000332814 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
C11orf88-201ENST00000332814 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
C11orf88-201ENST00000332814 KRTAP5-5Q701N2 237 aaPredicted RBP5.22□□□□□ -1.57
C11orf88-201ENST00000332814 HMCN1Q96RW7 5635 aa5.17□□□□□ -1.58
C11orf88-201ENST00000332814 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
C11orf88-201ENST00000332814 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
C11orf88-201ENST00000332814 GPR98Q8WXG9 6306 aa5.1□□□□□ -1.59
C11orf88-201ENST00000332814 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
C11orf88-201ENST00000332814 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
C11orf88-201ENST00000332814 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
C11orf88-201ENST00000332814 KRTAP9-6A8MVA2 160 aa4.99□□□□□ -1.61
C11orf88-201ENST00000332814 MT1AP04731 61 aa4.99□□□□□ -1.61
C11orf88-201ENST00000332814 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
C11orf88-201ENST00000332814 SVIPQ8NHG7 77 aa4.96□□□□□ -1.62
C11orf88-201ENST00000332814 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
C11orf88-201ENST00000332814 PRO0628Q9UI54 55 aa4.91□□□□□ -1.62
C11orf88-201ENST00000332814 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
C11orf88-201ENST00000332814 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
C11orf88-201ENST00000332814 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
C11orf88-201ENST00000332814 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
C11orf88-201ENST00000332814 MT3P25713 68 aa4.68□□□□□ -1.66
C11orf88-201ENST00000332814 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
C11orf88-201ENST00000332814 KTN1-AS1Q86SY8 53 aa4.68□□□□□ -1.66
C11orf88-201ENST00000332814 KRTAP5-7Q6L8G8 165 aa4.64□□□□□ -1.67
C11orf88-201ENST00000332814 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
C11orf88-201ENST00000332814 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
C11orf88-201ENST00000332814 KRTAP5-8O75690 187 aa4.38□□□□□ -1.71
C11orf88-201ENST00000332814 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.72
C11orf88-201ENST00000332814 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
C11orf88-201ENST00000332814 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
C11orf88-201ENST00000332814 LUZP6Q538Z0 58 aa4.18□□□□□ -1.74
C11orf88-201ENST00000332814 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
C11orf88-201ENST00000332814 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
C11orf88-201ENST00000332814 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
C11orf88-201ENST00000332814 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
C11orf88-201ENST00000332814 NDUFAF8A1L188 74 aa4□□□□□ -1.77
C11orf88-201ENST00000332814 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
C11orf88-201ENST00000332814 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
C11orf88-201ENST00000332814 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
C11orf88-201ENST00000332814 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
C11orf88-201ENST00000332814 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
C11orf88-201ENST00000332814 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
C11orf88-201ENST00000332814 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
C11orf88-201ENST00000332814 PRM1P04553 51 aa2.94□□□□□ -1.94
C11orf88-201ENST00000332814 INE1O15225 51 aa2.86□□□□□ -1.95
C11orf88-201ENST00000332814 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
C11orf88-201ENST00000332814 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
C11orf88-201ENST00000332814 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 255.2 ms