RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
LRRC28-202ENST00000331450 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
LRRC28-202ENST00000331450 MT1LQ93083 61 aa5.75□□□□□ -1.49
LRRC28-202ENST00000331450 MT1GP13640 62 aa5.7□□□□□ -1.5
LRRC28-202ENST00000331450 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
LRRC28-202ENST00000331450 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
LRRC28-202ENST00000331450 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
LRRC28-202ENST00000331450 MT1MQ8N339 61 aa5.63□□□□□ -1.51
LRRC28-202ENST00000331450 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
LRRC28-202ENST00000331450 PMAIP1Q13794 54 aa5.53□□□□□ -1.52
LRRC28-202ENST00000331450 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
LRRC28-202ENST00000331450 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
LRRC28-202ENST00000331450 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
LRRC28-202ENST00000331450 GPR98Q8WXG9 6306 aa5.5□□□□□ -1.53
LRRC28-202ENST00000331450 KRTAP19-4Q3LI73 84 aa5.48□□□□□ -1.53
LRRC28-202ENST00000331450 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
LRRC28-202ENST00000331450 PRO0628Q9UI54 55 aa5.48□□□□□ -1.53
LRRC28-202ENST00000331450 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
LRRC28-202ENST00000331450 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
LRRC28-202ENST00000331450 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
LRRC28-202ENST00000331450 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
LRRC28-202ENST00000331450 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
LRRC28-202ENST00000331450 KRTAP4-6Q9BYQ5 205 aa5.25□□□□□ -1.57
LRRC28-202ENST00000331450 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
LRRC28-202ENST00000331450 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
LRRC28-202ENST00000331450 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
LRRC28-202ENST00000331450 LCE4AQ5TA78 99 aa5.15□□□□□ -1.59
LRRC28-202ENST00000331450 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.59
LRRC28-202ENST00000331450 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
LRRC28-202ENST00000331450 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
LRRC28-202ENST00000331450 MT4P47944 62 aa5.01□□□□□ -1.61
LRRC28-202ENST00000331450 MT1AP04731 61 aa4.9□□□□□ -1.63
LRRC28-202ENST00000331450 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
LRRC28-202ENST00000331450 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
LRRC28-202ENST00000331450 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
LRRC28-202ENST00000331450 SVIPQ8NHG7 77 aa4.85□□□□□ -1.63
LRRC28-202ENST00000331450 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.63
LRRC28-202ENST00000331450 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
LRRC28-202ENST00000331450 KRTAP5-10Q6L8G5 202 aa4.81□□□□□ -1.64
LRRC28-202ENST00000331450 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
LRRC28-202ENST00000331450 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
LRRC28-202ENST00000331450 KRTAP5-7Q6L8G8 165 aa4.72□□□□□ -1.65
LRRC28-202ENST00000331450 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
LRRC28-202ENST00000331450 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
LRRC28-202ENST00000331450 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
LRRC28-202ENST00000331450 KRTAP4-12Q9BQ66 201 aa4.61□□□□□ -1.67
LRRC28-202ENST00000331450 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
LRRC28-202ENST00000331450 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
LRRC28-202ENST00000331450 MT3P25713 68 aa4.43□□□□□ -1.7
LRRC28-202ENST00000331450 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
LRRC28-202ENST00000331450 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
LRRC28-202ENST00000331450 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
LRRC28-202ENST00000331450 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
LRRC28-202ENST00000331450 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
LRRC28-202ENST00000331450 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
LRRC28-202ENST00000331450 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
LRRC28-202ENST00000331450 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
LRRC28-202ENST00000331450 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
LRRC28-202ENST00000331450 H3BS24 57 aa4.01□□□□□ -1.77
LRRC28-202ENST00000331450 LCE1EQ5T753 118 aa4□□□□□ -1.77
LRRC28-202ENST00000331450 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
LRRC28-202ENST00000331450 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
LRRC28-202ENST00000331450 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
LRRC28-202ENST00000331450 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
LRRC28-202ENST00000331450 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
LRRC28-202ENST00000331450 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
LRRC28-202ENST00000331450 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
LRRC28-202ENST00000331450 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
LRRC28-202ENST00000331450 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
LRRC28-202ENST00000331450 INE1O15225 51 aa3.18□□□□□ -1.9
LRRC28-202ENST00000331450 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
LRRC28-202ENST00000331450 PRM1P04553 51 aa3.04□□□□□ -1.92
LRRC28-202ENST00000331450 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
LRRC28-202ENST00000331450 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
LRRC28-202ENST00000331450 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
LRRC28-202ENST00000331450 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
LRRC28-202ENST00000331450 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 112.2 ms