RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 V9GYY9 64 aa8.29□□□□□ -1.08
TMEM54-201ENST00000329151 Q1T7F1 81 aa8.24□□□□□ -1.09
TMEM54-201ENST00000329151 MT1LQ93083 61 aa8.24□□□□□ -1.09
TMEM54-201ENST00000329151 PCP4P48539 62 aa8.22□□□□□ -1.09
TMEM54-201ENST00000329151 PSPHP1O15172 72 aa8.21□□□□□ -1.1
TMEM54-201ENST00000329151 MIR22HGQ0VDD5 57 aa8.2□□□□□ -1.1
TMEM54-201ENST00000329151 C10orf95Q9H7T3 257 aa8.2□□□□□ -1.1
TMEM54-201ENST00000329151 TNP1P09430 55 aa8.17□□□□□ -1.1
TMEM54-201ENST00000329151 AHNAK2Q8IVF2 5795 aa8.15□□□□□ -1.1
TMEM54-201ENST00000329151 LCE3AQ5TA76 89 aa8.13□□□□□ -1.11
TMEM54-201ENST00000329151 KRTAP4-3Q9BYR4 195 aa8.08□□□□□ -1.12
TMEM54-201ENST00000329151 RPS28P62857 69 aaKnown RBP8.05□□□□□ -1.12
TMEM54-201ENST00000329151 KRTAP5-4Q6L8H1 288 aa8.04□□□□□ -1.12
TMEM54-201ENST00000329151 K7ERS5 55 aa8.02□□□□□ -1.13
TMEM54-201ENST00000329151 KRTAP4-6Q9BYQ5 205 aa7.98□□□□□ -1.13
TMEM54-201ENST00000329151 A6NED7 52 aa7.95□□□□□ -1.14
TMEM54-201ENST00000329151 KRTAP5-10Q6L8G5 202 aa7.94□□□□□ -1.14
TMEM54-201ENST00000329151 KRTAP12-3P60328 96 aa7.85□□□□□ -1.15
TMEM54-201ENST00000329151 KRTAP25-1Q3LHN0 102 aa7.82□□□□□ -1.16
TMEM54-201ENST00000329151 KRTAP4-7Q9BYR0 210 aa7.8□□□□□ -1.16
TMEM54-201ENST00000329151 KRTAP5-3Q6L8H2 238 aa7.72□□□□□ -1.17
TMEM54-201ENST00000329151 KRTAP5-7Q6L8G8 165 aa7.7□□□□□ -1.18
TMEM54-201ENST00000329151 KRTAP20-2Q3LI61 65 aa7.67□□□□□ -1.18
TMEM54-201ENST00000329151 KRTAP12-4P60329 112 aa7.64□□□□□ -1.19
TMEM54-201ENST00000329151 SPRR5A0A1B0GTR4 108 aa7.62□□□□□ -1.19
TMEM54-201ENST00000329151 CDC42SE1Q9NRR8 79 aa7.62□□□□□ -1.19
TMEM54-201ENST00000329151 KRTAP5-5Q701N2 237 aaPredicted RBP7.57□□□□□ -1.2
TMEM54-201ENST00000329151 KRTAP23-1A1A580 65 aa7.53□□□□□ -1.2
TMEM54-201ENST00000329151 ROMO1P60602 79 aa7.51□□□□□ -1.21
TMEM54-201ENST00000329151 LOC100996750A0A140TA64 210 aa7.41□□□□□ -1.22
TMEM54-201ENST00000329151 KRTAP19-4Q3LI73 84 aa7.39□□□□□ -1.23
TMEM54-201ENST00000329151 SYNE1Q8NF91 8797 aaKnown RBP7.38□□□□□ -1.23
TMEM54-201ENST00000329151 KRTAP15-1Q3LI76 137 aa7.28□□□□□ -1.24
TMEM54-201ENST00000329151 LCE3CQ5T5A8 94 aa7.17□□□□□ -1.26
TMEM54-201ENST00000329151 BRK1Q8WUW1 75 aa7.12□□□□□ -1.27
TMEM54-201ENST00000329151 KRTAP4-11Q9BYQ6 195 aa7.09□□□□□ -1.27
TMEM54-201ENST00000329151 MT1AP04731 61 aa7.03□□□□□ -1.28
TMEM54-201ENST00000329151 KRTAP6-1Q3LI64 71 aa6.98□□□□□ -1.29
TMEM54-201ENST00000329151 KRTAP5-2Q701N4 177 aa6.98□□□□□ -1.29
TMEM54-201ENST00000329151 KRTAP9-4Q9BYQ2 154 aa6.82□□□□□ -1.32
TMEM54-201ENST00000329151 AHNAKQ09666 5890 aaKnown RBP6.82□□□□□ -1.32
TMEM54-201ENST00000329151 KRTAP5-8O75690 187 aa6.81□□□□□ -1.32
TMEM54-201ENST00000329151 KRTAP6-2Q3LI66 62 aa6.77□□□□□ -1.33
TMEM54-201ENST00000329151 MUC5BQ9HC84 5762 aaPredicted RBP6.76□□□□□ -1.33
TMEM54-201ENST00000329151 MUC5ACP98088 5654 aa6.75□□□□□ -1.33
TMEM54-201ENST00000329151 PMAIP1Q13794 54 aa6.71□□□□□ -1.34
TMEM54-201ENST00000329151 KRTAP9-6A8MVA2 160 aa6.69□□□□□ -1.34
TMEM54-201ENST00000329151 OBSCNQ5VST9 7968 aa6.66□□□□□ -1.34
TMEM54-201ENST00000329151 KRTAP9-9Q9BYP9 154 aa6.65□□□□□ -1.34
TMEM54-201ENST00000329151 MT3P25713 68 aa6.5□□□□□ -1.37
TMEM54-201ENST00000329151 PRO0628Q9UI54 55 aa6.42□□□□□ -1.38
TMEM54-201ENST00000329151 PRAC1Q96KF2 57 aa6.4□□□□□ -1.38
TMEM54-201ENST00000329151 KRTAP5-1Q6L8H4 278 aa6.32□□□□□ -1.4
TMEM54-201ENST00000329151 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
TMEM54-201ENST00000329151 LCE1EQ5T753 118 aa5.99□□□□□ -1.45
TMEM54-201ENST00000329151 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
TMEM54-201ENST00000329151 LCE1BQ5T7P3 118 aa5.75□□□□□ -1.49
TMEM54-201ENST00000329151 KRTAP4-2Q9BYR5 136 aa5.64□□□□□ -1.51
TMEM54-201ENST00000329151 LCE1CQ5T751 118 aa5.55□□□□□ -1.52
TMEM54-201ENST00000329151 LUZP6Q538Z0 58 aa5.38□□□□□ -1.55
TMEM54-201ENST00000329151 KRTAP4-12Q9BQ66 201 aa5.3□□□□□ -1.56
TMEM54-201ENST00000329151 LCE3DQ9BYE3 92 aa5.19□□□□□ -1.58
TMEM54-201ENST00000329151 KRTAP5-11Q6L8G4 156 aa5.06□□□□□ -1.6
TMEM54-201ENST00000329151 LCE1FQ5T754 118 aa5.02□□□□□ -1.61
TMEM54-201ENST00000329151 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
TMEM54-201ENST00000329151 LCE3EQ5T5B0 92 aa4.92□□□□□ -1.62
TMEM54-201ENST00000329151 PHGR1C9JFL3 82 aa4.73□□□□□ -1.65
TMEM54-201ENST00000329151 KRTAP21-2Q3LI59 83 aa4.56□□□□□ -1.68
TMEM54-201ENST00000329151 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
TMEM54-201ENST00000329151 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
TMEM54-201ENST00000329151 MUC19Q7Z5P9 8384 aa4.15□□□□□ -1.75
TMEM54-201ENST00000329151 PRM1P04553 51 aa3.85□□□□□ -1.79
TMEM54-201ENST00000329151 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
TMEM54-201ENST00000329151 INE1O15225 51 aa3.68□□□□□ -1.82
TMEM54-201ENST00000329151 KRTAP21-1Q3LI58 79 aa3.6□□□□□ -1.83
TMEM54-201ENST00000329151 H3BS24 57 aa3.05□□□□□ -1.92
TMEM54-201ENST00000329151 MUC16Q8WXI7 14507 aa2.95□□□□□ -1.94
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms