RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 CDC42SE1Q9NRR8 79 aa7.59□□□□□ -1.19
TNFRSF18-201ENST00000328596 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
TNFRSF18-201ENST00000328596 DSTQ03001 7570 aaKnown RBP7.58□□□□□ -1.2
TNFRSF18-201ENST00000328596 MT1GP13640 62 aa7.55□□□□□ -1.2
TNFRSF18-201ENST00000328596 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
TNFRSF18-201ENST00000328596 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
TNFRSF18-201ENST00000328596 MT1LQ93083 61 aa7.46□□□□□ -1.22
TNFRSF18-201ENST00000328596 MT1MQ8N339 61 aa7.41□□□□□ -1.22
TNFRSF18-201ENST00000328596 ROMO1P60602 79 aa7.36□□□□□ -1.23
TNFRSF18-201ENST00000328596 KRTAP23-1A1A580 65 aa7.32□□□□□ -1.24
TNFRSF18-201ENST00000328596 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
TNFRSF18-201ENST00000328596 KRTAP4-9Q9BYQ8 210 aa7.26□□□□□ -1.25
TNFRSF18-201ENST00000328596 KRTAP4-3Q9BYR4 195 aa7.23□□□□□ -1.25
TNFRSF18-201ENST00000328596 BRK1Q8WUW1 75 aa7.17□□□□□ -1.26
TNFRSF18-201ENST00000328596 LCE4AQ5TA78 99 aa7.14□□□□□ -1.27
TNFRSF18-201ENST00000328596 LCE1DQ5T752 114 aa7.11□□□□□ -1.27
TNFRSF18-201ENST00000328596 KRTAP4-7Q9BYR0 210 aa7.09□□□□□ -1.27
TNFRSF18-201ENST00000328596 MT4P47944 62 aa7.04□□□□□ -1.28
TNFRSF18-201ENST00000328596 KRTAP5-4Q6L8H1 288 aa7.03□□□□□ -1.28
TNFRSF18-201ENST00000328596 KRTAP19-4Q3LI73 84 aa6.99□□□□□ -1.29
TNFRSF18-201ENST00000328596 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
TNFRSF18-201ENST00000328596 HMCN1Q96RW7 5635 aa6.96□□□□□ -1.3
TNFRSF18-201ENST00000328596 GPR98Q8WXG9 6306 aa6.94□□□□□ -1.3
TNFRSF18-201ENST00000328596 KRTAP4-6Q9BYQ5 205 aa6.86□□□□□ -1.31
TNFRSF18-201ENST00000328596 KRTAP5-5Q701N2 237 aaPredicted RBP6.79□□□□□ -1.32
TNFRSF18-201ENST00000328596 PMAIP1Q13794 54 aa6.78□□□□□ -1.32
TNFRSF18-201ENST00000328596 LCE3CQ5T5A8 94 aa6.77□□□□□ -1.33
TNFRSF18-201ENST00000328596 LOC100996750A0A140TA64 210 aa6.72□□□□□ -1.33
TNFRSF18-201ENST00000328596 AHNAK2Q8IVF2 5795 aa6.67□□□□□ -1.34
TNFRSF18-201ENST00000328596 KRTAP20-2Q3LI61 65 aa6.62□□□□□ -1.35
TNFRSF18-201ENST00000328596 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
TNFRSF18-201ENST00000328596 SPRR5A0A1B0GTR4 108 aa6.61□□□□□ -1.35
TNFRSF18-201ENST00000328596 KRTAP12-4P60329 112 aa6.6□□□□□ -1.35
TNFRSF18-201ENST00000328596 KRTAP5-10Q6L8G5 202 aa6.56□□□□□ -1.36
TNFRSF18-201ENST00000328596 SYNE1Q8NF91 8797 aaKnown RBP6.53□□□□□ -1.36
TNFRSF18-201ENST00000328596 KRTAP5-3Q6L8H2 238 aa6.44□□□□□ -1.38
TNFRSF18-201ENST00000328596 PRAC1Q96KF2 57 aa6.41□□□□□ -1.38
TNFRSF18-201ENST00000328596 KRTAP9-6A8MVA2 160 aa6.36□□□□□ -1.39
TNFRSF18-201ENST00000328596 MT1AP04731 61 aa6.35□□□□□ -1.39
TNFRSF18-201ENST00000328596 KRTAP6-1Q3LI64 71 aa6.3□□□□□ -1.4
TNFRSF18-201ENST00000328596 KRTAP5-7Q6L8G8 165 aa6.3□□□□□ -1.4
TNFRSF18-201ENST00000328596 KTN1-AS1Q86SY8 53 aa6.23□□□□□ -1.41
TNFRSF18-201ENST00000328596 KRTAP5-2Q701N4 177 aa6.17□□□□□ -1.42
TNFRSF18-201ENST00000328596 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
TNFRSF18-201ENST00000328596 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
TNFRSF18-201ENST00000328596 KRTAP6-2Q3LI66 62 aa6.01□□□□□ -1.45
TNFRSF18-201ENST00000328596 SVIPQ8NHG7 77 aa5.96□□□□□ -1.46
TNFRSF18-201ENST00000328596 KRTAP5-8O75690 187 aa5.82□□□□□ -1.48
TNFRSF18-201ENST00000328596 MT3P25713 68 aa5.81□□□□□ -1.48
TNFRSF18-201ENST00000328596 OBSCNQ5VST9 7968 aa5.77□□□□□ -1.49
TNFRSF18-201ENST00000328596 KRTAP5-1Q6L8H4 278 aa5.51□□□□□ -1.53
TNFRSF18-201ENST00000328596 KRTAP9-9Q9BYP9 154 aa5.51□□□□□ -1.53
TNFRSF18-201ENST00000328596 MUC5BQ9HC84 5762 aaPredicted RBP5.47□□□□□ -1.53
TNFRSF18-201ENST00000328596 MUC5ACP98088 5654 aa5.45□□□□□ -1.54
TNFRSF18-201ENST00000328596 AHNAKQ09666 5890 aaKnown RBP5.42□□□□□ -1.54
TNFRSF18-201ENST00000328596 LUZP6Q538Z0 58 aa5.39□□□□□ -1.55
TNFRSF18-201ENST00000328596 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
TNFRSF18-201ENST00000328596 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
TNFRSF18-201ENST00000328596 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
TNFRSF18-201ENST00000328596 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
TNFRSF18-201ENST00000328596 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
TNFRSF18-201ENST00000328596 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
TNFRSF18-201ENST00000328596 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
TNFRSF18-201ENST00000328596 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
TNFRSF18-201ENST00000328596 KRTAP4-12Q9BQ66 201 aa4.5□□□□□ -1.69
TNFRSF18-201ENST00000328596 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
TNFRSF18-201ENST00000328596 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
TNFRSF18-201ENST00000328596 KRTAP21-2Q3LI59 83 aa4.16□□□□□ -1.74
TNFRSF18-201ENST00000328596 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
TNFRSF18-201ENST00000328596 INE1O15225 51 aa3.87□□□□□ -1.79
TNFRSF18-201ENST00000328596 PHGR1C9JFL3 82 aa3.85□□□□□ -1.79
TNFRSF18-201ENST00000328596 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
TNFRSF18-201ENST00000328596 PRM1P04553 51 aa3.77□□□□□ -1.81
TNFRSF18-201ENST00000328596 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
TNFRSF18-201ENST00000328596 H3BS24 57 aa2.95□□□□□ -1.94
TNFRSF18-201ENST00000328596 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
TNFRSF18-201ENST00000328596 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms