RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 TMEM258P61165 79 aa6.35□□□□□ -1.39
PTPMT1-201ENST00000326656 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.4
PTPMT1-201ENST00000326656 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
PTPMT1-201ENST00000326656 MT4P47944 62 aa6.32□□□□□ -1.4
PTPMT1-201ENST00000326656 SMIM26A0A096LP01 95 aa6.31□□□□□ -1.4
PTPMT1-201ENST00000326656 MT1MQ8N339 61 aa6.3□□□□□ -1.4
PTPMT1-201ENST00000326656 AHNAK2Q8IVF2 5795 aa6.28□□□□□ -1.4
PTPMT1-201ENST00000326656 MT1LQ93083 61 aa6.27□□□□□ -1.41
PTPMT1-201ENST00000326656 A0A1B0GU69 56 aa6.25□□□□□ -1.41
PTPMT1-201ENST00000326656 KRTAP5-10Q6L8G5 202 aa6.22□□□□□ -1.41
PTPMT1-201ENST00000326656 TNP1P09430 55 aa6.2□□□□□ -1.42
PTPMT1-201ENST00000326656 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
PTPMT1-201ENST00000326656 A8MU10 97 aa6.16□□□□□ -1.42
PTPMT1-201ENST00000326656 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
PTPMT1-201ENST00000326656 KRTAP5-4Q6L8H1 288 aa6.16□□□□□ -1.42
PTPMT1-201ENST00000326656 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
PTPMT1-201ENST00000326656 PRR15LQ9BU68 103 aa6.04□□□□□ -1.44
PTPMT1-201ENST00000326656 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
PTPMT1-201ENST00000326656 KRTAP5-7Q6L8G8 165 aa6.02□□□□□ -1.45
PTPMT1-201ENST00000326656 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
PTPMT1-201ENST00000326656 LINC01558Q9Y6Z2 57 aa5.98□□□□□ -1.45
PTPMT1-201ENST00000326656 RPS28P62857 69 aaKnown RBP5.97□□□□□ -1.45
PTPMT1-201ENST00000326656 V9GYY9 64 aa5.93□□□□□ -1.46
PTPMT1-201ENST00000326656 Q1T7F1 81 aa5.88□□□□□ -1.47
PTPMT1-201ENST00000326656 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
PTPMT1-201ENST00000326656 UQCR11O14957 56 aa5.83□□□□□ -1.48
PTPMT1-201ENST00000326656 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
PTPMT1-201ENST00000326656 PSPHP1O15172 72 aa5.8□□□□□ -1.48
PTPMT1-201ENST00000326656 KRTAP20-2Q3LI61 65 aa5.79□□□□□ -1.48
PTPMT1-201ENST00000326656 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
PTPMT1-201ENST00000326656 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
PTPMT1-201ENST00000326656 SVIPQ8NHG7 77 aa5.7□□□□□ -1.5
PTPMT1-201ENST00000326656 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
PTPMT1-201ENST00000326656 A6NED7 52 aa5.65□□□□□ -1.5
PTPMT1-201ENST00000326656 K7ERS5 55 aa5.63□□□□□ -1.51
PTPMT1-201ENST00000326656 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
PTPMT1-201ENST00000326656 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
PTPMT1-201ENST00000326656 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
PTPMT1-201ENST00000326656 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
PTPMT1-201ENST00000326656 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
PTPMT1-201ENST00000326656 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
PTPMT1-201ENST00000326656 MT1AP04731 61 aa5.35□□□□□ -1.55
PTPMT1-201ENST00000326656 KRTAP5-2Q701N4 177 aa5.35□□□□□ -1.55
PTPMT1-201ENST00000326656 AHNAKQ09666 5890 aaKnown RBP5.32□□□□□ -1.56
PTPMT1-201ENST00000326656 KRTAP6-1Q3LI64 71 aa5.3□□□□□ -1.56
PTPMT1-201ENST00000326656 MUC5ACP98088 5654 aa5.29□□□□□ -1.56
PTPMT1-201ENST00000326656 MUC5BQ9HC84 5762 aaPredicted RBP5.24□□□□□ -1.57
PTPMT1-201ENST00000326656 KRTAP5-8O75690 187 aa5.22□□□□□ -1.57
PTPMT1-201ENST00000326656 ROMO1P60602 79 aa5.2□□□□□ -1.58
PTPMT1-201ENST00000326656 OBSCNQ5VST9 7968 aa5.13□□□□□ -1.59
PTPMT1-201ENST00000326656 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
PTPMT1-201ENST00000326656 KRTAP6-2Q3LI66 62 aa5.11□□□□□ -1.59
PTPMT1-201ENST00000326656 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
PTPMT1-201ENST00000326656 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
PTPMT1-201ENST00000326656 MT3P25713 68 aa4.93□□□□□ -1.62
PTPMT1-201ENST00000326656 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
PTPMT1-201ENST00000326656 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
PTPMT1-201ENST00000326656 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
PTPMT1-201ENST00000326656 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
PTPMT1-201ENST00000326656 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
PTPMT1-201ENST00000326656 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
PTPMT1-201ENST00000326656 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
PTPMT1-201ENST00000326656 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
PTPMT1-201ENST00000326656 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
PTPMT1-201ENST00000326656 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
PTPMT1-201ENST00000326656 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
PTPMT1-201ENST00000326656 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
PTPMT1-201ENST00000326656 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
PTPMT1-201ENST00000326656 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
PTPMT1-201ENST00000326656 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
PTPMT1-201ENST00000326656 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
PTPMT1-201ENST00000326656 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
PTPMT1-201ENST00000326656 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
PTPMT1-201ENST00000326656 INE1O15225 51 aa3□□□□□ -1.93
PTPMT1-201ENST00000326656 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
PTPMT1-201ENST00000326656 PRM1P04553 51 aa2.69□□□□□ -1.98
PTPMT1-201ENST00000326656 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 329.9 ms