RNA–Protein interactions for RNA: ENST00000325674.11

CAST-202, Transcript of calpastatin, humanhuman

TSL 5 BASIC

Gene CAST, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-202ENST00000325674 LCE5AQ5TCM9 118 aa2.38□□□□□ -2.03
CAST-202ENST00000325674 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
CAST-202ENST00000325674 KIAA1109Q2LD37 5005 aa2.37□□□□□ -2.03
CAST-202ENST00000325674 M0R2T5 61 aa2.36□□□□□ -2.03
CAST-202ENST00000325674 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
CAST-202ENST00000325674 MT1FP04733 61 aa2.3□□□□□ -2.04
CAST-202ENST00000325674 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
CAST-202ENST00000325674 MT2AP02795 61 aa2.29□□□□□ -2.04
CAST-202ENST00000325674 KRTAP9-3Q9BYQ3 159 aa2.28□□□□□ -2.04
CAST-202ENST00000325674 LCE1AQ5T7P2 110 aa2.26□□□□□ -2.05
CAST-202ENST00000325674 MT1HP80294 61 aa2.26□□□□□ -2.05
CAST-202ENST00000325674 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
CAST-202ENST00000325674 MT1EP04732 61 aa2.21□□□□□ -2.06
CAST-202ENST00000325674 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
CAST-202ENST00000325674 KRTAP9-7A8MTY7 169 aa2.19□□□□□ -2.06
CAST-202ENST00000325674 MT1LQ93083 61 aa2.18□□□□□ -2.06
CAST-202ENST00000325674 MT1AP04731 61 aa2.18□□□□□ -2.06
CAST-202ENST00000325674 FAT4Q6V0I7 4981 aa2.14□□□□□ -2.07
CAST-202ENST00000325674 RNF213Q63HN8 5207 aa2.11□□□□□ -2.07
CAST-202ENST00000325674 PRM1P04553 51 aa2.11□□□□□ -2.07
CAST-202ENST00000325674 LCE1EQ5T753 118 aa2.07□□□□□ -2.08
CAST-202ENST00000325674 LCE4AQ5TA78 99 aa2.07□□□□□ -2.08
CAST-202ENST00000325674 KMT2DO14686 5537 aa2.03□□□□□ -2.08
CAST-202ENST00000325674 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
CAST-202ENST00000325674 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
CAST-202ENST00000325674 MT1GP13640 62 aa1.95□□□□□ -2.1
CAST-202ENST00000325674 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
CAST-202ENST00000325674 USH2AO75445 5202 aa1.93□□□□□ -2.1
CAST-202ENST00000325674 KRTAP19-6Q3LI70 58 aa1.93□□□□□ -2.1
CAST-202ENST00000325674 MT1MQ8N339 61 aa1.92□□□□□ -2.1
CAST-202ENST00000325674 SPRR2FQ96RM1 72 aa1.92□□□□□ -2.1
CAST-202ENST00000325674 KRTAP4-3Q9BYR4 195 aa1.92□□□□□ -2.1
CAST-202ENST00000325674 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
CAST-202ENST00000325674 SYNE1Q8NF91 8797 aaKnown RBP1.9□□□□□ -2.11
CAST-202ENST00000325674 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
CAST-202ENST00000325674 LCE1FQ5T754 118 aa1.86□□□□□ -2.11
CAST-202ENST00000325674 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.11
CAST-202ENST00000325674 KRTAP19-3Q7Z4W3 81 aa1.84□□□□□ -2.11
CAST-202ENST00000325674 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
CAST-202ENST00000325674 SPRR2AP35326 72 aa1.81□□□□□ -2.12
CAST-202ENST00000325674 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
CAST-202ENST00000325674 KRTAP5-9P26371 169 aa1.77□□□□□ -2.13
CAST-202ENST00000325674 SPRR2BP35325 72 aa1.75□□□□□ -2.13
CAST-202ENST00000325674 SPRR2EP22531 72 aa1.75□□□□□ -2.13
CAST-202ENST00000325674 CRCT1Q9UGL9 99 aa1.72□□□□□ -2.13
CAST-202ENST00000325674 SPRR2DP22532 72 aa1.71□□□□□ -2.14
CAST-202ENST00000325674 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
CAST-202ENST00000325674 MT3P25713 68 aa1.65□□□□□ -2.15
CAST-202ENST00000325674 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
CAST-202ENST00000325674 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
CAST-202ENST00000325674 FSIP2Q5CZC0 6907 aa1.63□□□□□ -2.15
CAST-202ENST00000325674 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
CAST-202ENST00000325674 OBSCNQ5VST9 7968 aa1.59□□□□□ -2.16
CAST-202ENST00000325674 KRTAP5-4Q6L8H1 288 aa1.55□□□□□ -2.16
CAST-202ENST00000325674 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
CAST-202ENST00000325674 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
CAST-202ENST00000325674 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
CAST-202ENST00000325674 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
CAST-202ENST00000325674 MDN1Q9NU22 5596 aa1.49□□□□□ -2.17
CAST-202ENST00000325674 KRTAP5-1Q6L8H4 278 aa1.48□□□□□ -2.17
CAST-202ENST00000325674 SYNE2Q8WXH0 6885 aaKnown RBP1.46□□□□□ -2.18
CAST-202ENST00000325674 KRTAP5-8O75690 187 aa1.44□□□□□ -2.18
CAST-202ENST00000325674 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
CAST-202ENST00000325674 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
CAST-202ENST00000325674 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
CAST-202ENST00000325674 LCE1BQ5T7P3 118 aa1.41□□□□□ -2.18
CAST-202ENST00000325674 MACF1Q9UPN3 7388 aaKnown RBP1.33□□□□□ -2.2
CAST-202ENST00000325674 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
CAST-202ENST00000325674 KRTAP20-2Q3LI61 65 aa1.27□□□□□ -2.21
CAST-202ENST00000325674 AHNAK2Q8IVF2 5795 aa1.24□□□□□ -2.21
CAST-202ENST00000325674 KRTAP20-1Q3LI63 56 aa1.24□□□□□ -2.21
CAST-202ENST00000325674 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
CAST-202ENST00000325674 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
CAST-202ENST00000325674 NEBP20929 6669 aa1.13□□□□□ -2.23
CAST-202ENST00000325674 MT4P47944 62 aa1.11□□□□□ -2.23
CAST-202ENST00000325674 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
CAST-202ENST00000325674 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 160.6 ms