RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 SMIM26A0A096LP01 95 aa4.48□□□□□ -1.69
TPM3-204ENST00000323144 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
TPM3-204ENST00000323144 SPINT4Q6UDR6 99 aa4.47□□□□□ -1.69
TPM3-204ENST00000323144 MT1MQ8N339 61 aa4.43□□□□□ -1.7
TPM3-204ENST00000323144 MT1GP13640 62 aa4.42□□□□□ -1.7
TPM3-204ENST00000323144 SEC61GP60059 68 aa4.42□□□□□ -1.7
TPM3-204ENST00000323144 Q1T7F1 81 aa4.42□□□□□ -1.7
TPM3-204ENST00000323144 A0A1B0GU33 70 aa4.41□□□□□ -1.7
TPM3-204ENST00000323144 MT1LQ93083 61 aa4.41□□□□□ -1.7
TPM3-204ENST00000323144 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
TPM3-204ENST00000323144 V9GYY9 64 aa4.4□□□□□ -1.71
TPM3-204ENST00000323144 MT4P47944 62 aa4.39□□□□□ -1.71
TPM3-204ENST00000323144 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
TPM3-204ENST00000323144 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
TPM3-204ENST00000323144 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
TPM3-204ENST00000323144 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
TPM3-204ENST00000323144 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
TPM3-204ENST00000323144 A8MU10 97 aa4.35□□□□□ -1.71
TPM3-204ENST00000323144 C10orf95Q9H7T3 257 aa4.33□□□□□ -1.72
TPM3-204ENST00000323144 A0A1B0GU69 56 aa4.28□□□□□ -1.72
TPM3-204ENST00000323144 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
TPM3-204ENST00000323144 PRR15LQ9BU68 103 aa4.27□□□□□ -1.73
TPM3-204ENST00000323144 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
TPM3-204ENST00000323144 PSPHP1O15172 72 aa4.26□□□□□ -1.73
TPM3-204ENST00000323144 TNP1P09430 55 aa4.23□□□□□ -1.73
TPM3-204ENST00000323144 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
TPM3-204ENST00000323144 UQCR11O14957 56 aa4.16□□□□□ -1.74
TPM3-204ENST00000323144 A6NED7 52 aa4.14□□□□□ -1.75
TPM3-204ENST00000323144 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
TPM3-204ENST00000323144 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
TPM3-204ENST00000323144 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
TPM3-204ENST00000323144 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
TPM3-204ENST00000323144 BRK1Q8WUW1 75 aa4.08□□□□□ -1.76
TPM3-204ENST00000323144 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
TPM3-204ENST00000323144 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
TPM3-204ENST00000323144 KRTAP15-1Q3LI76 137 aa4.04□□□□□ -1.76
TPM3-204ENST00000323144 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
TPM3-204ENST00000323144 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
TPM3-204ENST00000323144 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
TPM3-204ENST00000323144 K7ERS5 55 aa3.91□□□□□ -1.78
TPM3-204ENST00000323144 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
TPM3-204ENST00000323144 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
TPM3-204ENST00000323144 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
TPM3-204ENST00000323144 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
TPM3-204ENST00000323144 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
TPM3-204ENST00000323144 ROMO1P60602 79 aa3.76□□□□□ -1.81
TPM3-204ENST00000323144 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
TPM3-204ENST00000323144 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
TPM3-204ENST00000323144 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
TPM3-204ENST00000323144 MT1AP04731 61 aa3.73□□□□□ -1.81
TPM3-204ENST00000323144 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
TPM3-204ENST00000323144 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
TPM3-204ENST00000323144 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
TPM3-204ENST00000323144 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
TPM3-204ENST00000323144 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
TPM3-204ENST00000323144 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.85
TPM3-204ENST00000323144 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
TPM3-204ENST00000323144 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
TPM3-204ENST00000323144 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
TPM3-204ENST00000323144 MT3P25713 68 aa3.36□□□□□ -1.87
TPM3-204ENST00000323144 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
TPM3-204ENST00000323144 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
TPM3-204ENST00000323144 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
TPM3-204ENST00000323144 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
TPM3-204ENST00000323144 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
TPM3-204ENST00000323144 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
TPM3-204ENST00000323144 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
TPM3-204ENST00000323144 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
TPM3-204ENST00000323144 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
TPM3-204ENST00000323144 INE1O15225 51 aa2.52□□□□□ -2.01
TPM3-204ENST00000323144 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
TPM3-204ENST00000323144 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
TPM3-204ENST00000323144 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
TPM3-204ENST00000323144 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
TPM3-204ENST00000323144 PRM1P04553 51 aa1.93□□□□□ -2.1
TPM3-204ENST00000323144 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
TPM3-204ENST00000323144 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 16.4 ms