RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
SF3B2-201ENST00000322535 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
SF3B2-201ENST00000322535 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
SF3B2-201ENST00000322535 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
SF3B2-201ENST00000322535 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
SF3B2-201ENST00000322535 MDN1Q9NU22 5596 aa3.51□□□□□ -1.85
SF3B2-201ENST00000322535 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
SF3B2-201ENST00000322535 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
SF3B2-201ENST00000322535 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
SF3B2-201ENST00000322535 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
SF3B2-201ENST00000322535 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
SF3B2-201ENST00000322535 MT1EP04732 61 aa3.41□□□□□ -1.86
SF3B2-201ENST00000322535 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
SF3B2-201ENST00000322535 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
SF3B2-201ENST00000322535 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
SF3B2-201ENST00000322535 MT1LQ93083 61 aa3.35□□□□□ -1.87
SF3B2-201ENST00000322535 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
SF3B2-201ENST00000322535 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
SF3B2-201ENST00000322535 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
SF3B2-201ENST00000322535 KRTAP19-3Q7Z4W3 81 aa3.26□□□□□ -1.89
SF3B2-201ENST00000322535 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
SF3B2-201ENST00000322535 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
SF3B2-201ENST00000322535 MT1MQ8N339 61 aa3.22□□□□□ -1.89
SF3B2-201ENST00000322535 MT1GP13640 62 aa3.21□□□□□ -1.9
SF3B2-201ENST00000322535 SPRR2EP22531 72 aa3.2□□□□□ -1.9
SF3B2-201ENST00000322535 SPRR2BP35325 72 aa3.2□□□□□ -1.9
SF3B2-201ENST00000322535 SPRR2AP35326 72 aa3.2□□□□□ -1.9
SF3B2-201ENST00000322535 PRM1P04553 51 aa3.2□□□□□ -1.9
SF3B2-201ENST00000322535 KRTAP9-7A8MTY7 169 aa3.2□□□□□ -1.9
SF3B2-201ENST00000322535 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
SF3B2-201ENST00000322535 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
SF3B2-201ENST00000322535 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
SF3B2-201ENST00000322535 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
SF3B2-201ENST00000322535 LCE3BQ5TA77 95 aa3.12□□□□□ -1.91
SF3B2-201ENST00000322535 SPRR2DP22532 72 aa3.06□□□□□ -1.92
SF3B2-201ENST00000322535 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
SF3B2-201ENST00000322535 NEBP20929 6669 aa3.05□□□□□ -1.92
SF3B2-201ENST00000322535 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
SF3B2-201ENST00000322535 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
SF3B2-201ENST00000322535 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
SF3B2-201ENST00000322535 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
SF3B2-201ENST00000322535 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
SF3B2-201ENST00000322535 MT1AP04731 61 aa2.82□□□□□ -1.96
SF3B2-201ENST00000322535 MT4P47944 62 aa2.79□□□□□ -1.96
SF3B2-201ENST00000322535 KRTAP4-6Q9BYQ5 205 aa2.74□□□□□ -1.97
SF3B2-201ENST00000322535 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
SF3B2-201ENST00000322535 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
SF3B2-201ENST00000322535 KRTAP9-4Q9BYQ2 154 aa2.66□□□□□ -1.98
SF3B2-201ENST00000322535 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
SF3B2-201ENST00000322535 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
SF3B2-201ENST00000322535 LCE4AQ5TA78 99 aa2.6□□□□□ -1.99
SF3B2-201ENST00000322535 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
SF3B2-201ENST00000322535 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
SF3B2-201ENST00000322535 MT3P25713 68 aa2.52□□□□□ -2.01
SF3B2-201ENST00000322535 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
SF3B2-201ENST00000322535 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
SF3B2-201ENST00000322535 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
SF3B2-201ENST00000322535 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
SF3B2-201ENST00000322535 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
SF3B2-201ENST00000322535 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
SF3B2-201ENST00000322535 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
SF3B2-201ENST00000322535 KRTAP4-12Q9BQ66 201 aa2.2□□□□□ -2.06
SF3B2-201ENST00000322535 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
SF3B2-201ENST00000322535 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
SF3B2-201ENST00000322535 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
SF3B2-201ENST00000322535 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
SF3B2-201ENST00000322535 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
SF3B2-201ENST00000322535 KRTAP4-2Q9BYR5 136 aa2.07□□□□□ -2.08
SF3B2-201ENST00000322535 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
SF3B2-201ENST00000322535 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
SF3B2-201ENST00000322535 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
SF3B2-201ENST00000322535 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
SF3B2-201ENST00000322535 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.11
SF3B2-201ENST00000322535 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
SF3B2-201ENST00000322535 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
SF3B2-201ENST00000322535 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
SF3B2-201ENST00000322535 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 83.2 ms