RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 SPRR2FQ96RM1 72 aa9.25□□□□□ -0.93
TM6SF1-202ENST00000322019 MDN1Q9NU22 5596 aa9.09□□□□□ -0.95
TM6SF1-202ENST00000322019 KRTAP19-3Q7Z4W3 81 aa9.08□□□□□ -0.96
TM6SF1-202ENST00000322019 KRTAP9-6A0A140TA67 174 aa9.06□□□□□ -0.96
TM6SF1-202ENST00000322019 KRTAP9-6A8MVA2 160 aa8.98□□□□□ -0.97
TM6SF1-202ENST00000322019 KRTAP4-3Q9BYR4 195 aa8.98□□□□□ -0.97
TM6SF1-202ENST00000322019 A0A0A0MQY5 61 aa8.95□□□□□ -0.98
TM6SF1-202ENST00000322019 MT1GP13640 62 aa8.95□□□□□ -0.98
TM6SF1-202ENST00000322019 KRTAP19-4Q3LI73 84 aa8.95□□□□□ -0.98
TM6SF1-202ENST00000322019 MT1MQ8N339 61 aa8.95□□□□□ -0.98
TM6SF1-202ENST00000322019 KRTAP5-9P26371 169 aa8.94□□□□□ -0.98
TM6SF1-202ENST00000322019 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.92□□□□□ -0.98
TM6SF1-202ENST00000322019 LCE5AQ5TCM9 118 aa8.9□□□□□ -0.99
TM6SF1-202ENST00000322019 DSTQ03001 7570 aaKnown RBP8.84□□□□□ -0.99
TM6SF1-202ENST00000322019 LCE1AQ5T7P2 110 aa8.77□□□□□ -1
TM6SF1-202ENST00000322019 LOC100996750A0A140TA64 210 aa8.71□□□□□ -1.01
TM6SF1-202ENST00000322019 SPRR2EP22531 72 aa8.69□□□□□ -1.02
TM6SF1-202ENST00000322019 SPRR2BP35325 72 aa8.69□□□□□ -1.02
TM6SF1-202ENST00000322019 SPRR2AP35326 72 aa8.69□□□□□ -1.02
TM6SF1-202ENST00000322019 KRTAP6-3Q3LI67 103 aa8.66□□□□□ -1.02
TM6SF1-202ENST00000322019 KRTAP9-7A8MTY7 169 aa8.35□□□□□ -1.07
TM6SF1-202ENST00000322019 KRTAP2-3P0C7H8 128 aa8.35□□□□□ -1.07
TM6SF1-202ENST00000322019 KRTAP2-4Q9BYR9 128 aa8.35□□□□□ -1.07
TM6SF1-202ENST00000322019 KRTAP2-1Q9BYU5 128 aa8.35□□□□□ -1.07
TM6SF1-202ENST00000322019 SPRR2DP22532 72 aa8.34□□□□□ -1.07
TM6SF1-202ENST00000322019 NEBP20929 6669 aa8.26□□□□□ -1.09
TM6SF1-202ENST00000322019 INE1O15225 51 aa8.23□□□□□ -1.09
TM6SF1-202ENST00000322019 KRTAP5-5Q701N2 237 aaPredicted RBP8.02□□□□□ -1.13
TM6SF1-202ENST00000322019 LCE3BQ5TA77 95 aa7.99□□□□□ -1.13
TM6SF1-202ENST00000322019 KRTAP6-1Q3LI64 71 aa7.94□□□□□ -1.14
TM6SF1-202ENST00000322019 MT1AP04731 61 aa7.88□□□□□ -1.15
TM6SF1-202ENST00000322019 SYNE1Q8NF91 8797 aaKnown RBP7.81□□□□□ -1.16
TM6SF1-202ENST00000322019 KRTAP5-4Q6L8H1 288 aa7.51□□□□□ -1.21
TM6SF1-202ENST00000322019 KRTAP4-9Q9BYQ8 210 aa7.5□□□□□ -1.21
TM6SF1-202ENST00000322019 KRTAP9-4Q9BYQ2 154 aa7.48□□□□□ -1.21
TM6SF1-202ENST00000322019 KRTAP2-2Q9BYT5 123 aa7.39□□□□□ -1.23
TM6SF1-202ENST00000322019 KRTAP20-1Q3LI63 56 aa7.37□□□□□ -1.23
TM6SF1-202ENST00000322019 MT4P47944 62 aa7.36□□□□□ -1.23
TM6SF1-202ENST00000322019 KRTAP12-4P60329 112 aa7.34□□□□□ -1.23
TM6SF1-202ENST00000322019 KRTAP4-6Q9BYQ5 205 aa7.32□□□□□ -1.24
TM6SF1-202ENST00000322019 KRTAP6-2Q3LI66 62 aa7.29□□□□□ -1.24
TM6SF1-202ENST00000322019 LCE4AQ5TA78 99 aa7.25□□□□□ -1.25
TM6SF1-202ENST00000322019 HMCN1Q96RW7 5635 aa7.21□□□□□ -1.26
TM6SF1-202ENST00000322019 LCE1DQ5T752 114 aa7.13□□□□□ -1.27
TM6SF1-202ENST00000322019 MT3P25713 68 aa7.11□□□□□ -1.27
TM6SF1-202ENST00000322019 OBSCNQ5VST9 7968 aa7.09□□□□□ -1.27
TM6SF1-202ENST00000322019 KRTAP20-2Q3LI61 65 aa7.08□□□□□ -1.28
TM6SF1-202ENST00000322019 LCE3DQ9BYE3 92 aa7.04□□□□□ -1.28
TM6SF1-202ENST00000322019 KRTAP5-2Q701N4 177 aa6.85□□□□□ -1.31
TM6SF1-202ENST00000322019 LCE3EQ5T5B0 92 aa6.84□□□□□ -1.31
TM6SF1-202ENST00000322019 KRTAP5-3Q6L8H2 238 aa6.79□□□□□ -1.32
TM6SF1-202ENST00000322019 PRM1P04553 51 aa6.36□□□□□ -1.39
TM6SF1-202ENST00000322019 AHNAK2Q8IVF2 5795 aa6.21□□□□□ -1.42
TM6SF1-202ENST00000322019 KRTAP4-11Q9BYQ6 195 aa6.09□□□□□ -1.43
TM6SF1-202ENST00000322019 LCE1EQ5T753 118 aa6.05□□□□□ -1.44
TM6SF1-202ENST00000322019 MUC5ACP98088 5654 aa5.97□□□□□ -1.45
TM6SF1-202ENST00000322019 KRTAP5-1Q6L8H4 278 aa5.96□□□□□ -1.46
TM6SF1-202ENST00000322019 LCE1BQ5T7P3 118 aa5.92□□□□□ -1.46
TM6SF1-202ENST00000322019 KRTAP5-8O75690 187 aa5.86□□□□□ -1.47
TM6SF1-202ENST00000322019 KRTAP5-10Q6L8G5 202 aa5.78□□□□□ -1.48
TM6SF1-202ENST00000322019 KRTAP4-2Q9BYR5 136 aa5.78□□□□□ -1.48
TM6SF1-202ENST00000322019 LCE1CQ5T751 118 aa5.7□□□□□ -1.5
TM6SF1-202ENST00000322019 KRTAP5-7Q6L8G8 165 aa5.59□□□□□ -1.51
TM6SF1-202ENST00000322019 GPR98Q8WXG9 6306 aa5.52□□□□□ -1.53
TM6SF1-202ENST00000322019 KRTAP9-9Q9BYP9 154 aa5.47□□□□□ -1.53
TM6SF1-202ENST00000322019 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.3□□□□□ -1.56
TM6SF1-202ENST00000322019 MUC5BQ9HC84 5762 aaPredicted RBP5.29□□□□□ -1.56
TM6SF1-202ENST00000322019 KRTAP4-12Q9BQ66 201 aa5.19□□□□□ -1.58
TM6SF1-202ENST00000322019 KRTAP21-2Q3LI59 83 aa5.16□□□□□ -1.58
TM6SF1-202ENST00000322019 KRTAP5-11Q6L8G4 156 aa5□□□□□ -1.61
TM6SF1-202ENST00000322019 KRTAP4-4Q9BYR3 166 aa4.75□□□□□ -1.65
TM6SF1-202ENST00000322019 AHNAKQ09666 5890 aaKnown RBP4.56□□□□□ -1.68
TM6SF1-202ENST00000322019 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
TM6SF1-202ENST00000322019 PHGR1C9JFL3 82 aa4.33□□□□□ -1.72
TM6SF1-202ENST00000322019 MUC19Q7Z5P9 8384 aa4.18□□□□□ -1.74
TM6SF1-202ENST00000322019 KRTAP21-1Q3LI58 79 aa3.96□□□□□ -1.77
TM6SF1-202ENST00000322019 MUC16Q8WXI7 14507 aa2.77□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms