RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 TNP1P09430 55 aa7.69□□□□□ -1.18
UBE2D3-201ENST00000321805 PP632Q6XCG6 107 aa7.69□□□□□ -1.18
UBE2D3-201ENST00000321805 LINC01558Q9Y6Z2 57 aa7.69□□□□□ -1.18
UBE2D3-201ENST00000321805 C10orf95Q9H7T3 257 aa7.65□□□□□ -1.18
UBE2D3-201ENST00000321805 TMEM258P61165 79 aa7.61□□□□□ -1.19
UBE2D3-201ENST00000321805 LCE3AQ5TA76 89 aa7.6□□□□□ -1.19
UBE2D3-201ENST00000321805 KRTAP4-2Q9BYR5 136 aa7.6□□□□□ -1.19
UBE2D3-201ENST00000321805 MT1LQ93083 61 aa7.58□□□□□ -1.2
UBE2D3-201ENST00000321805 MT1MQ8N339 61 aa7.56□□□□□ -1.2
UBE2D3-201ENST00000321805 KRTAP4-11Q9BYQ6 195 aa7.56□□□□□ -1.2
UBE2D3-201ENST00000321805 UQCR11O14957 56 aa7.53□□□□□ -1.2
UBE2D3-201ENST00000321805 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
UBE2D3-201ENST00000321805 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
UBE2D3-201ENST00000321805 GPR98Q8WXG9 6306 aa7.31□□□□□ -1.24
UBE2D3-201ENST00000321805 KRTAP4-3Q9BYR4 195 aa7.3□□□□□ -1.24
UBE2D3-201ENST00000321805 KRTAP25-1Q3LHN0 102 aa7.27□□□□□ -1.25
UBE2D3-201ENST00000321805 HMCN1Q96RW7 5635 aa7.27□□□□□ -1.25
UBE2D3-201ENST00000321805 KRTAP5-4Q6L8H1 288 aa7.25□□□□□ -1.25
UBE2D3-201ENST00000321805 V9GYY9 64 aa7.25□□□□□ -1.25
UBE2D3-201ENST00000321805 K7ERS5 55 aa7.24□□□□□ -1.25
UBE2D3-201ENST00000321805 MT4P47944 62 aa7.23□□□□□ -1.25
UBE2D3-201ENST00000321805 Q1T7F1 81 aa7.15□□□□□ -1.26
UBE2D3-201ENST00000321805 PSPHP1O15172 72 aa7.12□□□□□ -1.27
UBE2D3-201ENST00000321805 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
UBE2D3-201ENST00000321805 AHNAK2Q8IVF2 5795 aa6.99□□□□□ -1.29
UBE2D3-201ENST00000321805 KRTAP5-5Q701N2 237 aaPredicted RBP6.96□□□□□ -1.3
UBE2D3-201ENST00000321805 A6NED7 52 aa6.92□□□□□ -1.3
UBE2D3-201ENST00000321805 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
UBE2D3-201ENST00000321805 KRTAP5-10Q6L8G5 202 aa6.86□□□□□ -1.31
UBE2D3-201ENST00000321805 SPRR5A0A1B0GTR4 108 aa6.84□□□□□ -1.31
UBE2D3-201ENST00000321805 CDC42SE1Q9NRR8 79 aa6.84□□□□□ -1.31
UBE2D3-201ENST00000321805 KRTAP20-2Q3LI61 65 aa6.82□□□□□ -1.32
UBE2D3-201ENST00000321805 KRTAP12-4P60329 112 aa6.8□□□□□ -1.32
UBE2D3-201ENST00000321805 PCP4P48539 62 aa6.78□□□□□ -1.32
UBE2D3-201ENST00000321805 RPS28P62857 69 aaKnown RBP6.75□□□□□ -1.33
UBE2D3-201ENST00000321805 LCE3CQ5T5A8 94 aa6.75□□□□□ -1.33
UBE2D3-201ENST00000321805 ROMO1P60602 79 aa6.71□□□□□ -1.34
UBE2D3-201ENST00000321805 KRTAP5-3Q6L8H2 238 aa6.69□□□□□ -1.34
UBE2D3-201ENST00000321805 SYNE1Q8NF91 8797 aaKnown RBP6.64□□□□□ -1.35
UBE2D3-201ENST00000321805 KRTAP5-7Q6L8G8 165 aa6.61□□□□□ -1.35
UBE2D3-201ENST00000321805 MT1AP04731 61 aa6.48□□□□□ -1.37
UBE2D3-201ENST00000321805 KRTAP6-1Q3LI64 71 aa6.4□□□□□ -1.38
UBE2D3-201ENST00000321805 KRTAP5-2Q701N4 177 aa6.36□□□□□ -1.39
UBE2D3-201ENST00000321805 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
UBE2D3-201ENST00000321805 KRTAP6-2Q3LI66 62 aa6.11□□□□□ -1.43
UBE2D3-201ENST00000321805 KRTAP5-8O75690 187 aa6.02□□□□□ -1.45
UBE2D3-201ENST00000321805 MT3P25713 68 aa5.93□□□□□ -1.46
UBE2D3-201ENST00000321805 OBSCNQ5VST9 7968 aa5.92□□□□□ -1.46
UBE2D3-201ENST00000321805 BRK1Q8WUW1 75 aa5.86□□□□□ -1.47
UBE2D3-201ENST00000321805 MUC5BQ9HC84 5762 aaPredicted RBP5.77□□□□□ -1.49
UBE2D3-201ENST00000321805 MUC5ACP98088 5654 aa5.72□□□□□ -1.49
UBE2D3-201ENST00000321805 AHNAKQ09666 5890 aaKnown RBP5.72□□□□□ -1.49
UBE2D3-201ENST00000321805 KRTAP5-1Q6L8H4 278 aa5.68□□□□□ -1.5
UBE2D3-201ENST00000321805 PMAIP1Q13794 54 aa5.51□□□□□ -1.53
UBE2D3-201ENST00000321805 LCE1EQ5T753 118 aa5.49□□□□□ -1.53
UBE2D3-201ENST00000321805 PRO0628Q9UI54 55 aa5.37□□□□□ -1.55
UBE2D3-201ENST00000321805 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
UBE2D3-201ENST00000321805 KRTAP5-11Q6L8G4 156 aa5.12□□□□□ -1.59
UBE2D3-201ENST00000321805 LCE1CQ5T751 118 aa5.08□□□□□ -1.6
UBE2D3-201ENST00000321805 LCE1BQ5T7P3 118 aa5.08□□□□□ -1.6
UBE2D3-201ENST00000321805 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
UBE2D3-201ENST00000321805 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.01□□□□□ -1.61
UBE2D3-201ENST00000321805 A0A0A0MQY5 61 aa4.95□□□□□ -1.62
UBE2D3-201ENST00000321805 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
UBE2D3-201ENST00000321805 SVIPQ8NHG7 77 aa4.78□□□□□ -1.64
UBE2D3-201ENST00000321805 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
UBE2D3-201ENST00000321805 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
UBE2D3-201ENST00000321805 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
UBE2D3-201ENST00000321805 KRTAP21-2Q3LI59 83 aa4.23□□□□□ -1.73
UBE2D3-201ENST00000321805 KRTAP4-4Q9BYR3 166 aa4.2□□□□□ -1.74
UBE2D3-201ENST00000321805 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
UBE2D3-201ENST00000321805 PHGR1C9JFL3 82 aa3.98□□□□□ -1.77
UBE2D3-201ENST00000321805 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
UBE2D3-201ENST00000321805 PRM1P04553 51 aa3.39□□□□□ -1.87
UBE2D3-201ENST00000321805 INE1O15225 51 aa3.13□□□□□ -1.91
UBE2D3-201ENST00000321805 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
UBE2D3-201ENST00000321805 MUC16Q8WXI7 14507 aa2.59□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 5.5 ms