RNA–Protein interactions for RNA: ENST00000321143.8

HCCS-201, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HCCS, Length 2,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-201ENST00000321143 KRTAP9-6A8MVA2 160 aa6.64□□□□□ -1.35
HCCS-201ENST00000321143 INE1O15225 51 aa6.63□□□□□ -1.35
HCCS-201ENST00000321143 MT1EP04732 61 aa6.63□□□□□ -1.35
HCCS-201ENST00000321143 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
HCCS-201ENST00000321143 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
HCCS-201ENST00000321143 MT1LQ93083 61 aa6.61□□□□□ -1.35
HCCS-201ENST00000321143 KRTAP9-6A0A140TA67 174 aa6.56□□□□□ -1.36
HCCS-201ENST00000321143 SPRR2FQ96RM1 72 aa6.43□□□□□ -1.38
HCCS-201ENST00000321143 MDN1Q9NU22 5596 aa6.4□□□□□ -1.38
HCCS-201ENST00000321143 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.39□□□□□ -1.39
HCCS-201ENST00000321143 KRTAP2-3P0C7H8 128 aa6.38□□□□□ -1.39
HCCS-201ENST00000321143 KRTAP2-4Q9BYR9 128 aa6.38□□□□□ -1.39
HCCS-201ENST00000321143 KRTAP2-1Q9BYU5 128 aa6.38□□□□□ -1.39
HCCS-201ENST00000321143 KRTAP5-9P26371 169 aa6.27□□□□□ -1.41
HCCS-201ENST00000321143 DSTQ03001 7570 aaKnown RBP6.25□□□□□ -1.41
HCCS-201ENST00000321143 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
HCCS-201ENST00000321143 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
HCCS-201ENST00000321143 MT1GP13640 62 aa6.2□□□□□ -1.42
HCCS-201ENST00000321143 MT1MQ8N339 61 aa6.2□□□□□ -1.42
HCCS-201ENST00000321143 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
HCCS-201ENST00000321143 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
HCCS-201ENST00000321143 LCE1AQ5T7P2 110 aa6.14□□□□□ -1.43
HCCS-201ENST00000321143 SPRR2EP22531 72 aa6.08□□□□□ -1.44
HCCS-201ENST00000321143 SPRR2BP35325 72 aa6.08□□□□□ -1.44
HCCS-201ENST00000321143 SPRR2AP35326 72 aa6.08□□□□□ -1.44
HCCS-201ENST00000321143 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
HCCS-201ENST00000321143 NEBP20929 6669 aa5.9□□□□□ -1.46
HCCS-201ENST00000321143 SPRR2DP22532 72 aa5.83□□□□□ -1.48
HCCS-201ENST00000321143 LCE3BQ5TA77 95 aa5.65□□□□□ -1.51
HCCS-201ENST00000321143 KRTAP12-4P60329 112 aa5.61□□□□□ -1.51
HCCS-201ENST00000321143 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
HCCS-201ENST00000321143 MT1AP04731 61 aa5.57□□□□□ -1.52
HCCS-201ENST00000321143 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
HCCS-201ENST00000321143 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
HCCS-201ENST00000321143 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
HCCS-201ENST00000321143 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
HCCS-201ENST00000321143 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
HCCS-201ENST00000321143 KRTAP4-12Q9BQ66 201 aa5.46□□□□□ -1.54
HCCS-201ENST00000321143 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
HCCS-201ENST00000321143 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
HCCS-201ENST00000321143 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
HCCS-201ENST00000321143 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
HCCS-201ENST00000321143 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
HCCS-201ENST00000321143 KRTAP5-4Q6L8H1 288 aa5.24□□□□□ -1.57
HCCS-201ENST00000321143 KRTAP4-2Q9BYR5 136 aa5.19□□□□□ -1.58
HCCS-201ENST00000321143 MT4P47944 62 aa5.17□□□□□ -1.58
HCCS-201ENST00000321143 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.59
HCCS-201ENST00000321143 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
HCCS-201ENST00000321143 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
HCCS-201ENST00000321143 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
HCCS-201ENST00000321143 KRTAP5-3Q6L8H2 238 aa5.02□□□□□ -1.61
HCCS-201ENST00000321143 MT3P25713 68 aa5.01□□□□□ -1.61
HCCS-201ENST00000321143 PRM1P04553 51 aa4.94□□□□□ -1.62
HCCS-201ENST00000321143 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
HCCS-201ENST00000321143 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
HCCS-201ENST00000321143 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
HCCS-201ENST00000321143 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
HCCS-201ENST00000321143 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
HCCS-201ENST00000321143 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
HCCS-201ENST00000321143 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
HCCS-201ENST00000321143 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
HCCS-201ENST00000321143 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
HCCS-201ENST00000321143 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
HCCS-201ENST00000321143 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
HCCS-201ENST00000321143 LCE1CQ5T751 118 aa3.91□□□□□ -1.78
HCCS-201ENST00000321143 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
HCCS-201ENST00000321143 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
HCCS-201ENST00000321143 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
HCCS-201ENST00000321143 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
HCCS-201ENST00000321143 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
HCCS-201ENST00000321143 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
HCCS-201ENST00000321143 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
HCCS-201ENST00000321143 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
HCCS-201ENST00000321143 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
HCCS-201ENST00000321143 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
HCCS-201ENST00000321143 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
HCCS-201ENST00000321143 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms