RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 LCE5AQ5TCM9 118 aa6.78□□□□□ -1.32
CIRBP-201ENST00000320936 KRTAP25-1Q3LHN0 102 aa6.75□□□□□ -1.33
CIRBP-201ENST00000320936 MT1GP13640 62 aa6.69□□□□□ -1.34
CIRBP-201ENST00000320936 PP632Q6XCG6 107 aa6.69□□□□□ -1.34
CIRBP-201ENST00000320936 MT1LQ93083 61 aa6.67□□□□□ -1.34
CIRBP-201ENST00000320936 KRTAP12-3P60328 96 aa6.64□□□□□ -1.35
CIRBP-201ENST00000320936 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
CIRBP-201ENST00000320936 MT1MQ8N339 61 aa6.59□□□□□ -1.35
CIRBP-201ENST00000320936 DSTQ03001 7570 aaKnown RBP6.53□□□□□ -1.36
CIRBP-201ENST00000320936 ROMO1P60602 79 aa6.51□□□□□ -1.37
CIRBP-201ENST00000320936 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
CIRBP-201ENST00000320936 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
CIRBP-201ENST00000320936 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
CIRBP-201ENST00000320936 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
CIRBP-201ENST00000320936 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
CIRBP-201ENST00000320936 BRK1Q8WUW1 75 aa6.24□□□□□ -1.41
CIRBP-201ENST00000320936 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
CIRBP-201ENST00000320936 LCE4AQ5TA78 99 aa6.2□□□□□ -1.42
CIRBP-201ENST00000320936 MT4P47944 62 aa6.16□□□□□ -1.42
CIRBP-201ENST00000320936 LCE1DQ5T752 114 aa6.15□□□□□ -1.43
CIRBP-201ENST00000320936 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
CIRBP-201ENST00000320936 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
CIRBP-201ENST00000320936 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
CIRBP-201ENST00000320936 HMCN1Q96RW7 5635 aa6.02□□□□□ -1.45
CIRBP-201ENST00000320936 KRTAP5-5Q701N2 237 aaPredicted RBP5.98□□□□□ -1.45
CIRBP-201ENST00000320936 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
CIRBP-201ENST00000320936 GPR98Q8WXG9 6306 aa5.86□□□□□ -1.47
CIRBP-201ENST00000320936 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
CIRBP-201ENST00000320936 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
CIRBP-201ENST00000320936 KRTAP20-2Q3LI61 65 aa5.77□□□□□ -1.49
CIRBP-201ENST00000320936 SPRR5A0A1B0GTR4 108 aa5.75□□□□□ -1.49
CIRBP-201ENST00000320936 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
CIRBP-201ENST00000320936 AHNAK2Q8IVF2 5795 aa5.71□□□□□ -1.5
CIRBP-201ENST00000320936 MT1AP04731 61 aa5.68□□□□□ -1.5
CIRBP-201ENST00000320936 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
CIRBP-201ENST00000320936 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
CIRBP-201ENST00000320936 PRO0628Q9UI54 55 aa5.59□□□□□ -1.51
CIRBP-201ENST00000320936 PRAC1Q96KF2 57 aa5.58□□□□□ -1.52
CIRBP-201ENST00000320936 KRTAP5-10Q6L8G5 202 aa5.55□□□□□ -1.52
CIRBP-201ENST00000320936 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
CIRBP-201ENST00000320936 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
CIRBP-201ENST00000320936 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
CIRBP-201ENST00000320936 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
CIRBP-201ENST00000320936 KTN1-AS1Q86SY8 53 aa5.3□□□□□ -1.56
CIRBP-201ENST00000320936 KRTAP5-7Q6L8G8 165 aa5.29□□□□□ -1.56
CIRBP-201ENST00000320936 KRTAP4-11Q9BYQ6 195 aa5.21□□□□□ -1.58
CIRBP-201ENST00000320936 MT3P25713 68 aa5.2□□□□□ -1.58
CIRBP-201ENST00000320936 SVIPQ8NHG7 77 aa5.17□□□□□ -1.58
CIRBP-201ENST00000320936 KRTAP5-8O75690 187 aa5□□□□□ -1.61
CIRBP-201ENST00000320936 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
CIRBP-201ENST00000320936 KRTAP5-1Q6L8H4 278 aa4.77□□□□□ -1.65
CIRBP-201ENST00000320936 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
CIRBP-201ENST00000320936 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
CIRBP-201ENST00000320936 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
CIRBP-201ENST00000320936 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
CIRBP-201ENST00000320936 MUC5BQ9HC84 5762 aaPredicted RBP4.64□□□□□ -1.67
CIRBP-201ENST00000320936 AHNAKQ09666 5890 aaKnown RBP4.61□□□□□ -1.67
CIRBP-201ENST00000320936 LCE3DQ9BYE3 92 aa4.47□□□□□ -1.69
CIRBP-201ENST00000320936 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.69
CIRBP-201ENST00000320936 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
CIRBP-201ENST00000320936 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
CIRBP-201ENST00000320936 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
CIRBP-201ENST00000320936 NDUFAF8A1L188 74 aa3.98□□□□□ -1.77
CIRBP-201ENST00000320936 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
CIRBP-201ENST00000320936 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
CIRBP-201ENST00000320936 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
CIRBP-201ENST00000320936 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
CIRBP-201ENST00000320936 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
CIRBP-201ENST00000320936 H3BS24 57 aa3.66□□□□□ -1.82
CIRBP-201ENST00000320936 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
CIRBP-201ENST00000320936 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
CIRBP-201ENST00000320936 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
CIRBP-201ENST00000320936 PRM1P04553 51 aa3.36□□□□□ -1.87
CIRBP-201ENST00000320936 INE1O15225 51 aa3.31□□□□□ -1.88
CIRBP-201ENST00000320936 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
CIRBP-201ENST00000320936 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
CIRBP-201ENST00000320936 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms