RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
PRPF18-201ENST00000320054 LCE1AQ5T7P2 110 aa4.9□□□□□ -1.63
PRPF18-201ENST00000320054 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
PRPF18-201ENST00000320054 SPRR2EP22531 72 aa4.88□□□□□ -1.63
PRPF18-201ENST00000320054 SPRR2BP35325 72 aa4.88□□□□□ -1.63
PRPF18-201ENST00000320054 SPRR2AP35326 72 aa4.88□□□□□ -1.63
PRPF18-201ENST00000320054 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
PRPF18-201ENST00000320054 MT1LQ93083 61 aa4.86□□□□□ -1.63
PRPF18-201ENST00000320054 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
PRPF18-201ENST00000320054 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
PRPF18-201ENST00000320054 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
PRPF18-201ENST00000320054 MT1GP13640 62 aa4.82□□□□□ -1.64
PRPF18-201ENST00000320054 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
PRPF18-201ENST00000320054 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
PRPF18-201ENST00000320054 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
PRPF18-201ENST00000320054 NEBP20929 6669 aa4.79□□□□□ -1.64
PRPF18-201ENST00000320054 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
PRPF18-201ENST00000320054 MT1MQ8N339 61 aa4.73□□□□□ -1.65
PRPF18-201ENST00000320054 SPRR2DP22532 72 aa4.71□□□□□ -1.66
PRPF18-201ENST00000320054 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
PRPF18-201ENST00000320054 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
PRPF18-201ENST00000320054 LCE1DQ5T752 114 aa4.59□□□□□ -1.67
PRPF18-201ENST00000320054 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
PRPF18-201ENST00000320054 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
PRPF18-201ENST00000320054 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
PRPF18-201ENST00000320054 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
PRPF18-201ENST00000320054 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
PRPF18-201ENST00000320054 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
PRPF18-201ENST00000320054 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
PRPF18-201ENST00000320054 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
PRPF18-201ENST00000320054 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
PRPF18-201ENST00000320054 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
PRPF18-201ENST00000320054 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
PRPF18-201ENST00000320054 H3BS24 57 aa4.31□□□□□ -1.72
PRPF18-201ENST00000320054 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
PRPF18-201ENST00000320054 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
PRPF18-201ENST00000320054 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
PRPF18-201ENST00000320054 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
PRPF18-201ENST00000320054 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
PRPF18-201ENST00000320054 MT1AP04731 61 aa4.16□□□□□ -1.74
PRPF18-201ENST00000320054 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
PRPF18-201ENST00000320054 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
PRPF18-201ENST00000320054 MT4P47944 62 aa4.07□□□□□ -1.76
PRPF18-201ENST00000320054 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
PRPF18-201ENST00000320054 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
PRPF18-201ENST00000320054 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
PRPF18-201ENST00000320054 KRTAP20-2Q3LI61 65 aa3.95□□□□□ -1.78
PRPF18-201ENST00000320054 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
PRPF18-201ENST00000320054 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
PRPF18-201ENST00000320054 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
PRPF18-201ENST00000320054 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
PRPF18-201ENST00000320054 MT3P25713 68 aa3.77□□□□□ -1.81
PRPF18-201ENST00000320054 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
PRPF18-201ENST00000320054 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
PRPF18-201ENST00000320054 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
PRPF18-201ENST00000320054 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
PRPF18-201ENST00000320054 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
PRPF18-201ENST00000320054 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
PRPF18-201ENST00000320054 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
PRPF18-201ENST00000320054 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
PRPF18-201ENST00000320054 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.87
PRPF18-201ENST00000320054 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
PRPF18-201ENST00000320054 INE1O15225 51 aa3.19□□□□□ -1.9
PRPF18-201ENST00000320054 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
PRPF18-201ENST00000320054 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
PRPF18-201ENST00000320054 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
PRPF18-201ENST00000320054 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
PRPF18-201ENST00000320054 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
PRPF18-201ENST00000320054 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
PRPF18-201ENST00000320054 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.96
PRPF18-201ENST00000320054 PRM1P04553 51 aa2.77□□□□□ -1.97
PRPF18-201ENST00000320054 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
PRPF18-201ENST00000320054 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
PRPF18-201ENST00000320054 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
PRPF18-201ENST00000320054 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
PRPF18-201ENST00000320054 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
PRPF18-201ENST00000320054 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
PRPF18-201ENST00000320054 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 88.4 ms