RNA–Protein interactions for RNA: ENST00000315066.5

CNTD1-201, Transcript of cyclin N-terminal domain containing 1, humanhuman

TSL 1 (best)

Gene CNTD1, Length 2,657 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-201ENST00000315066 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
CNTD1-201ENST00000315066 R4GN34 69 aa2.25□□□□□ -2.05
CNTD1-201ENST00000315066 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
CNTD1-201ENST00000315066 FSIP2Q5CZC0 6907 aa2.2□□□□□ -2.06
CNTD1-201ENST00000315066 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
CNTD1-201ENST00000315066 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
CNTD1-201ENST00000315066 TNP1P09430 55 aa2.1□□□□□ -2.07
CNTD1-201ENST00000315066 KRTAP4-1Q9BYQ7 146 aa2.1□□□□□ -2.07
CNTD1-201ENST00000315066 KRTAP9-6A8MVA2 160 aa2.09□□□□□ -2.07
CNTD1-201ENST00000315066 MUC17Q685J3 4493 aa2.07□□□□□ -2.08
CNTD1-201ENST00000315066 USH2AO75445 5202 aa2.06□□□□□ -2.08
CNTD1-201ENST00000315066 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
CNTD1-201ENST00000315066 KRTAP4-3Q9BYR4 195 aa2.01□□□□□ -2.09
CNTD1-201ENST00000315066 KRTAP19-2Q3LHN2 52 aa2□□□□□ -2.09
CNTD1-201ENST00000315066 M0R2T5 61 aa2□□□□□ -2.09
CNTD1-201ENST00000315066 FLGP20930 4061 aaPredicted RBP1.99□□□□□ -2.09
CNTD1-201ENST00000315066 MT1HP80294 61 aa1.99□□□□□ -2.09
CNTD1-201ENST00000315066 SSPOA2VEC9 5147 aa1.95□□□□□ -2.1
CNTD1-201ENST00000315066 KRTAP10-10P60014 251 aa1.94□□□□□ -2.1
CNTD1-201ENST00000315066 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
CNTD1-201ENST00000315066 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
CNTD1-201ENST00000315066 KRTAP8-1Q8IUC2 63 aa1.91□□□□□ -2.1
CNTD1-201ENST00000315066 FCGBPQ9Y6R7 5405 aaPredicted RBP1.89□□□□□ -2.11
CNTD1-201ENST00000315066 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
CNTD1-201ENST00000315066 SYNE2Q8WXH0 6885 aaKnown RBP1.87□□□□□ -2.11
CNTD1-201ENST00000315066 SPRR2GQ9BYE4 73 aa1.86□□□□□ -2.11
CNTD1-201ENST00000315066 MT2AP02795 61 aa1.85□□□□□ -2.11
CNTD1-201ENST00000315066 MT1FP04733 61 aa1.85□□□□□ -2.11
CNTD1-201ENST00000315066 MACF1Q9UPN3 7388 aaKnown RBP1.84□□□□□ -2.11
CNTD1-201ENST00000315066 KRTAP12-3P60328 96 aa1.83□□□□□ -2.12
CNTD1-201ENST00000315066 KRTAP2-3P0C7H8 128 aa1.78□□□□□ -2.12
CNTD1-201ENST00000315066 KRTAP2-4Q9BYR9 128 aa1.78□□□□□ -2.12
CNTD1-201ENST00000315066 KRTAP2-1Q9BYU5 128 aa1.78□□□□□ -2.12
CNTD1-201ENST00000315066 MUC12Q9UKN1 5478 aa1.77□□□□□ -2.13
CNTD1-201ENST00000315066 KMT2DO14686 5537 aa1.77□□□□□ -2.13
CNTD1-201ENST00000315066 KRTAP19-8Q3LI54 63 aa1.77□□□□□ -2.13
CNTD1-201ENST00000315066 KRTAP5-5Q701N2 237 aaPredicted RBP1.76□□□□□ -2.13
CNTD1-201ENST00000315066 MDN1Q9NU22 5596 aa1.73□□□□□ -2.13
CNTD1-201ENST00000315066 KRTAP19-6Q3LI70 58 aa1.72□□□□□ -2.13
CNTD1-201ENST00000315066 NEBP20929 6669 aa1.71□□□□□ -2.14
CNTD1-201ENST00000315066 MT1BP07438 61 aa1.7□□□□□ -2.14
CNTD1-201ENST00000315066 MT1XP80297 61 aa1.7□□□□□ -2.14
CNTD1-201ENST00000315066 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
CNTD1-201ENST00000315066 KRTAP20-1Q3LI63 56 aa1.65□□□□□ -2.14
CNTD1-201ENST00000315066 KRTAP19-5Q3LI72 72 aa1.64□□□□□ -2.15
CNTD1-201ENST00000315066 KRTAP6-3Q3LI67 103 aa1.62□□□□□ -2.15
CNTD1-201ENST00000315066 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
CNTD1-201ENST00000315066 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.15
CNTD1-201ENST00000315066 DSTQ03001 7570 aaKnown RBP1.59□□□□□ -2.16
CNTD1-201ENST00000315066 SPRR2FQ96RM1 72 aa1.58□□□□□ -2.16
CNTD1-201ENST00000315066 SPRR2EP22531 72 aa1.53□□□□□ -2.16
CNTD1-201ENST00000315066 SPRR2BP35325 72 aa1.53□□□□□ -2.16
CNTD1-201ENST00000315066 SPRR2AP35326 72 aa1.53□□□□□ -2.16
CNTD1-201ENST00000315066 LCE1CQ5T751 118 aa1.53□□□□□ -2.16
CNTD1-201ENST00000315066 LCE1BQ5T7P3 118 aa1.53□□□□□ -2.16
CNTD1-201ENST00000315066 KRTAP19-7Q3SYF9 63 aa1.52□□□□□ -2.17
CNTD1-201ENST00000315066 OBSCNQ5VST9 7968 aa1.52□□□□□ -2.17
CNTD1-201ENST00000315066 MT1LQ93083 61 aa1.49□□□□□ -2.17
CNTD1-201ENST00000315066 MT1EP04732 61 aa1.48□□□□□ -2.17
CNTD1-201ENST00000315066 PRM1P04553 51 aa1.47□□□□□ -2.17
CNTD1-201ENST00000315066 SPRR2DP22532 72 aa1.47□□□□□ -2.17
CNTD1-201ENST00000315066 MT1AP04731 61 aa1.43□□□□□ -2.18
CNTD1-201ENST00000315066 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
CNTD1-201ENST00000315066 MT1GP13640 62 aa1.41□□□□□ -2.18
CNTD1-201ENST00000315066 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
CNTD1-201ENST00000315066 MUC5ACP98088 5654 aa1.39□□□□□ -2.19
CNTD1-201ENST00000315066 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
CNTD1-201ENST00000315066 MT1MQ8N339 61 aa1.37□□□□□ -2.19
CNTD1-201ENST00000315066 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
CNTD1-201ENST00000315066 MT4P47944 62 aa1.33□□□□□ -2.2
CNTD1-201ENST00000315066 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
CNTD1-201ENST00000315066 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
CNTD1-201ENST00000315066 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
CNTD1-201ENST00000315066 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
CNTD1-201ENST00000315066 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
CNTD1-201ENST00000315066 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
CNTD1-201ENST00000315066 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
CNTD1-201ENST00000315066 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 60.6 ms