RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 PRAC1Q96KF2 57 aa9.86□□□□□ -0.83
CGREF1-202ENST00000312734 KTN1-AS1Q86SY8 53 aa9.77□□□□□ -0.85
CGREF1-202ENST00000312734 KRTAP19-3Q7Z4W3 81 aa9.74□□□□□ -0.85
CGREF1-202ENST00000312734 MT1LQ93083 61 aa9.73□□□□□ -0.85
CGREF1-202ENST00000312734 NEBP20929 6669 aa9.7□□□□□ -0.86
CGREF1-202ENST00000312734 KRTAP15-1Q3LI76 137 aa9.64□□□□□ -0.87
CGREF1-202ENST00000312734 LCE5AQ5TCM9 118 aa9.63□□□□□ -0.87
CGREF1-202ENST00000312734 MT1GP13640 62 aa9.6□□□□□ -0.87
CGREF1-202ENST00000312734 SPRR2DP22532 72 aa9.54□□□□□ -0.88
CGREF1-202ENST00000312734 MT1MQ8N339 61 aa9.47□□□□□ -0.89
CGREF1-202ENST00000312734 KRTAP4-7Q9BYR0 210 aa9.4□□□□□ -0.9
CGREF1-202ENST00000312734 KRTAP19-4Q3LI73 84 aa9.33□□□□□ -0.92
CGREF1-202ENST00000312734 SVIPQ8NHG7 77 aa9.31□□□□□ -0.92
CGREF1-202ENST00000312734 KRTAP4-3Q9BYR4 195 aa9.31□□□□□ -0.92
CGREF1-202ENST00000312734 LCE3CQ5T5A8 94 aa9.29□□□□□ -0.92
CGREF1-202ENST00000312734 KRTAP20-1Q3LI63 56 aa9.2□□□□□ -0.94
CGREF1-202ENST00000312734 LCE3BQ5TA77 95 aa9.2□□□□□ -0.94
CGREF1-202ENST00000312734 KRTAP2-3P0C7H8 128 aa9.2□□□□□ -0.94
CGREF1-202ENST00000312734 KRTAP2-4Q9BYR9 128 aa9.2□□□□□ -0.94
CGREF1-202ENST00000312734 DSTQ03001 7570 aaKnown RBP9.15□□□□□ -0.95
CGREF1-202ENST00000312734 KRTAP2-2Q9BYT5 123 aa8.97□□□□□ -0.97
CGREF1-202ENST00000312734 KRTAP2-1Q9BYU5 128 aa8.97□□□□□ -0.97
CGREF1-202ENST00000312734 LOC100996750A0A140TA64 210 aa8.85□□□□□ -0.99
CGREF1-202ENST00000312734 KRTAP9-6A8MVA2 160 aa8.77□□□□□ -1.01
CGREF1-202ENST00000312734 SPRR5A0A1B0GTR4 108 aa8.63□□□□□ -1.03
CGREF1-202ENST00000312734 KRTAP5-5Q701N2 237 aaPredicted RBP8.57□□□□□ -1.04
CGREF1-202ENST00000312734 KRTAP5-4Q6L8H1 288 aa8.44□□□□□ -1.06
CGREF1-202ENST00000312734 LCE4AQ5TA78 99 aa8.43□□□□□ -1.06
CGREF1-202ENST00000312734 KRTAP4-9Q9BYQ8 210 aa8.39□□□□□ -1.07
CGREF1-202ENST00000312734 MT4P47944 62 aa8.32□□□□□ -1.08
CGREF1-202ENST00000312734 MT1AP04731 61 aa8.26□□□□□ -1.09
CGREF1-202ENST00000312734 LCE1DQ5T752 114 aa8.24□□□□□ -1.09
CGREF1-202ENST00000312734 KRTAP6-1Q3LI64 71 aa8.22□□□□□ -1.09
CGREF1-202ENST00000312734 KRTAP4-6Q9BYQ5 205 aa8.18□□□□□ -1.1
CGREF1-202ENST00000312734 SYNE1Q8NF91 8797 aaKnown RBP8.15□□□□□ -1.11
CGREF1-202ENST00000312734 KRTAP12-4P60329 112 aa8.14□□□□□ -1.11
CGREF1-202ENST00000312734 LUZP6Q538Z0 58 aa8.11□□□□□ -1.11
CGREF1-202ENST00000312734 HMCN1Q96RW7 5635 aa8.04□□□□□ -1.12
CGREF1-202ENST00000312734 KRTAP20-2Q3LI61 65 aa7.94□□□□□ -1.14
CGREF1-202ENST00000312734 KRTAP9-4Q9BYQ2 154 aa7.92□□□□□ -1.14
CGREF1-202ENST00000312734 KRTAP6-2Q3LI66 62 aa7.67□□□□□ -1.18
CGREF1-202ENST00000312734 KRTAP5-3Q6L8H2 238 aa7.67□□□□□ -1.18
CGREF1-202ENST00000312734 KRTAP5-2Q701N4 177 aa7.56□□□□□ -1.2
CGREF1-202ENST00000312734 MT3P25713 68 aa7.53□□□□□ -1.2
CGREF1-202ENST00000312734 NDUFAF8A1L188 74 aa7.52□□□□□ -1.21
CGREF1-202ENST00000312734 AHNAK2Q8IVF2 5795 aa7.36□□□□□ -1.23
CGREF1-202ENST00000312734 KRTAP5-10Q6L8G5 202 aa7.14□□□□□ -1.27
CGREF1-202ENST00000312734 GPR98Q8WXG9 6306 aa7.06□□□□□ -1.28
CGREF1-202ENST00000312734 OBSCNQ5VST9 7968 aa7.04□□□□□ -1.28
CGREF1-202ENST00000312734 KRTAP4-11Q9BYQ6 195 aa7.03□□□□□ -1.28
CGREF1-202ENST00000312734 LCE3DQ9BYE3 92 aa6.89□□□□□ -1.31
CGREF1-202ENST00000312734 KRTAP5-8O75690 187 aa6.76□□□□□ -1.33
CGREF1-202ENST00000312734 KRTAP5-7Q6L8G8 165 aa6.7□□□□□ -1.34
CGREF1-202ENST00000312734 LCE1EQ5T753 118 aa6.65□□□□□ -1.35
CGREF1-202ENST00000312734 KRTAP5-1Q6L8H4 278 aa6.63□□□□□ -1.35
CGREF1-202ENST00000312734 LCE3EQ5T5B0 92 aa6.62□□□□□ -1.35
CGREF1-202ENST00000312734 A0A0A0MQY5 61 aa6.4□□□□□ -1.38
CGREF1-202ENST00000312734 MUC5ACP98088 5654 aa6.35□□□□□ -1.39
CGREF1-202ENST00000312734 LCE1BQ5T7P3 118 aa6.31□□□□□ -1.4
CGREF1-202ENST00000312734 KRTAP9-9Q9BYP9 154 aa6.25□□□□□ -1.41
CGREF1-202ENST00000312734 KRTAP4-2Q9BYR5 136 aa6.23□□□□□ -1.41
CGREF1-202ENST00000312734 LCE1CQ5T751 118 aa6.18□□□□□ -1.42
CGREF1-202ENST00000312734 INE1O15225 51 aa6.12□□□□□ -1.43
CGREF1-202ENST00000312734 MUC5BQ9HC84 5762 aaPredicted RBP5.93□□□□□ -1.46
CGREF1-202ENST00000312734 H3BS24 57 aa5.81□□□□□ -1.48
CGREF1-202ENST00000312734 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.71□□□□□ -1.5
CGREF1-202ENST00000312734 AHNAKQ09666 5890 aaKnown RBP5.71□□□□□ -1.5
CGREF1-202ENST00000312734 PRM1P04553 51 aa5.54□□□□□ -1.52
CGREF1-202ENST00000312734 KRTAP5-11Q6L8G4 156 aa5.5□□□□□ -1.53
CGREF1-202ENST00000312734 KRTAP4-12Q9BQ66 201 aa5.41□□□□□ -1.54
CGREF1-202ENST00000312734 KRTAP21-2Q3LI59 83 aa5.37□□□□□ -1.55
CGREF1-202ENST00000312734 LCE1FQ5T754 118 aa5.11□□□□□ -1.59
CGREF1-202ENST00000312734 KRTAP4-4Q9BYR3 166 aa4.88□□□□□ -1.63
CGREF1-202ENST00000312734 PHGR1C9JFL3 82 aa4.74□□□□□ -1.65
CGREF1-202ENST00000312734 MUC19Q7Z5P9 8384 aa4.24□□□□□ -1.73
CGREF1-202ENST00000312734 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
CGREF1-202ENST00000312734 MUC16Q8WXI7 14507 aa3.01□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 28.1 ms