RNA–Protein interactions for RNA: ENST00000312349.4

FNDC9-201, Transcript of fibronectin type III domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC9, Length 2,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9-201ENST00000312349 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
FNDC9-201ENST00000312349 KRTAP8-1Q8IUC2 63 aa4.48□□□□□ -1.69
FNDC9-201ENST00000312349 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.7
FNDC9-201ENST00000312349 FSIP2Q5CZC0 6907 aa4.45□□□□□ -1.7
FNDC9-201ENST00000312349 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
FNDC9-201ENST00000312349 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
FNDC9-201ENST00000312349 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
FNDC9-201ENST00000312349 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
FNDC9-201ENST00000312349 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.74
FNDC9-201ENST00000312349 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
FNDC9-201ENST00000312349 FCGBPQ9Y6R7 5405 aaPredicted RBP4.14□□□□□ -1.75
FNDC9-201ENST00000312349 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
FNDC9-201ENST00000312349 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
FNDC9-201ENST00000312349 MT1EP04732 61 aa4.09□□□□□ -1.76
FNDC9-201ENST00000312349 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
FNDC9-201ENST00000312349 MT1LQ93083 61 aa4.05□□□□□ -1.76
FNDC9-201ENST00000312349 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
FNDC9-201ENST00000312349 INE1O15225 51 aa4.03□□□□□ -1.76
FNDC9-201ENST00000312349 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
FNDC9-201ENST00000312349 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
FNDC9-201ENST00000312349 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
FNDC9-201ENST00000312349 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
FNDC9-201ENST00000312349 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
FNDC9-201ENST00000312349 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
FNDC9-201ENST00000312349 KRTAP19-3Q7Z4W3 81 aa3.84□□□□□ -1.79
FNDC9-201ENST00000312349 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
FNDC9-201ENST00000312349 MT1MQ8N339 61 aa3.83□□□□□ -1.8
FNDC9-201ENST00000312349 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
FNDC9-201ENST00000312349 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
FNDC9-201ENST00000312349 MT1GP13640 62 aa3.79□□□□□ -1.8
FNDC9-201ENST00000312349 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
FNDC9-201ENST00000312349 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
FNDC9-201ENST00000312349 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
FNDC9-201ENST00000312349 CRCT1Q9UGL9 99 aa3.75□□□□□ -1.81
FNDC9-201ENST00000312349 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
FNDC9-201ENST00000312349 SPRR2EP22531 72 aa3.53□□□□□ -1.84
FNDC9-201ENST00000312349 SPRR2BP35325 72 aa3.53□□□□□ -1.84
FNDC9-201ENST00000312349 SPRR2AP35326 72 aa3.53□□□□□ -1.84
FNDC9-201ENST00000312349 MT3P25713 68 aa3.52□□□□□ -1.85
FNDC9-201ENST00000312349 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
FNDC9-201ENST00000312349 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
FNDC9-201ENST00000312349 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
FNDC9-201ENST00000312349 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
FNDC9-201ENST00000312349 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.87
FNDC9-201ENST00000312349 SPRR2DP22532 72 aa3.38□□□□□ -1.87
FNDC9-201ENST00000312349 MT1AP04731 61 aa3.38□□□□□ -1.87
FNDC9-201ENST00000312349 KRTAP12-4P60329 112 aa3.34□□□□□ -1.87
FNDC9-201ENST00000312349 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
FNDC9-201ENST00000312349 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
FNDC9-201ENST00000312349 NEBP20929 6669 aa3.28□□□□□ -1.88
FNDC9-201ENST00000312349 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
FNDC9-201ENST00000312349 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
FNDC9-201ENST00000312349 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
FNDC9-201ENST00000312349 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
FNDC9-201ENST00000312349 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
FNDC9-201ENST00000312349 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
FNDC9-201ENST00000312349 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
FNDC9-201ENST00000312349 MT4P47944 62 aa3.02□□□□□ -1.93
FNDC9-201ENST00000312349 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
FNDC9-201ENST00000312349 PRM1P04553 51 aa2.95□□□□□ -1.94
FNDC9-201ENST00000312349 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
FNDC9-201ENST00000312349 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
FNDC9-201ENST00000312349 KRTAP20-1Q3LI63 56 aa2.79□□□□□ -1.96
FNDC9-201ENST00000312349 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
FNDC9-201ENST00000312349 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
FNDC9-201ENST00000312349 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
FNDC9-201ENST00000312349 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
FNDC9-201ENST00000312349 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
FNDC9-201ENST00000312349 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
FNDC9-201ENST00000312349 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
FNDC9-201ENST00000312349 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
FNDC9-201ENST00000312349 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
FNDC9-201ENST00000312349 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
FNDC9-201ENST00000312349 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
FNDC9-201ENST00000312349 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
FNDC9-201ENST00000312349 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
FNDC9-201ENST00000312349 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 63.8 ms