RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
VANGL1-201ENST00000310260 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
VANGL1-201ENST00000310260 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
VANGL1-201ENST00000310260 MDN1Q9NU22 5596 aa4.59□□□□□ -1.67
VANGL1-201ENST00000310260 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
VANGL1-201ENST00000310260 SPRR2EP22531 72 aa4.56□□□□□ -1.68
VANGL1-201ENST00000310260 SPRR2BP35325 72 aa4.56□□□□□ -1.68
VANGL1-201ENST00000310260 SPRR2AP35326 72 aa4.56□□□□□ -1.68
VANGL1-201ENST00000310260 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
VANGL1-201ENST00000310260 MT1EP04732 61 aa4.51□□□□□ -1.69
VANGL1-201ENST00000310260 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
VANGL1-201ENST00000310260 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
VANGL1-201ENST00000310260 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
VANGL1-201ENST00000310260 NEBP20929 6669 aa4.45□□□□□ -1.7
VANGL1-201ENST00000310260 KRTAP2-3P0C7H8 128 aa4.43□□□□□ -1.7
VANGL1-201ENST00000310260 KRTAP2-4Q9BYR9 128 aa4.43□□□□□ -1.7
VANGL1-201ENST00000310260 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
VANGL1-201ENST00000310260 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
VANGL1-201ENST00000310260 SPRR2DP22532 72 aa4.39□□□□□ -1.71
VANGL1-201ENST00000310260 MT1LQ93083 61 aa4.38□□□□□ -1.71
VANGL1-201ENST00000310260 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
VANGL1-201ENST00000310260 MT1GP13640 62 aa4.32□□□□□ -1.72
VANGL1-201ENST00000310260 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
VANGL1-201ENST00000310260 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
VANGL1-201ENST00000310260 MT1MQ8N339 61 aa4.27□□□□□ -1.73
VANGL1-201ENST00000310260 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
VANGL1-201ENST00000310260 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
VANGL1-201ENST00000310260 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
VANGL1-201ENST00000310260 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
VANGL1-201ENST00000310260 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
VANGL1-201ENST00000310260 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
VANGL1-201ENST00000310260 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
VANGL1-201ENST00000310260 MT4P47944 62 aa3.87□□□□□ -1.79
VANGL1-201ENST00000310260 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
VANGL1-201ENST00000310260 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
VANGL1-201ENST00000310260 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
VANGL1-201ENST00000310260 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
VANGL1-201ENST00000310260 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
VANGL1-201ENST00000310260 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
VANGL1-201ENST00000310260 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
VANGL1-201ENST00000310260 MT1AP04731 61 aa3.7□□□□□ -1.82
VANGL1-201ENST00000310260 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
VANGL1-201ENST00000310260 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
VANGL1-201ENST00000310260 PRM1P04553 51 aa3.59□□□□□ -1.84
VANGL1-201ENST00000310260 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
VANGL1-201ENST00000310260 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
VANGL1-201ENST00000310260 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
VANGL1-201ENST00000310260 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
VANGL1-201ENST00000310260 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
VANGL1-201ENST00000310260 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
VANGL1-201ENST00000310260 MT3P25713 68 aa3.39□□□□□ -1.87
VANGL1-201ENST00000310260 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
VANGL1-201ENST00000310260 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
VANGL1-201ENST00000310260 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
VANGL1-201ENST00000310260 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
VANGL1-201ENST00000310260 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
VANGL1-201ENST00000310260 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
VANGL1-201ENST00000310260 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
VANGL1-201ENST00000310260 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
VANGL1-201ENST00000310260 KRTAP5-8O75690 187 aa3.09□□□□□ -1.92
VANGL1-201ENST00000310260 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
VANGL1-201ENST00000310260 LCE1EQ5T753 118 aa2.96□□□□□ -1.93
VANGL1-201ENST00000310260 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
VANGL1-201ENST00000310260 MUC5ACP98088 5654 aa2.9□□□□□ -1.95
VANGL1-201ENST00000310260 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
VANGL1-201ENST00000310260 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
VANGL1-201ENST00000310260 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
VANGL1-201ENST00000310260 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
VANGL1-201ENST00000310260 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
VANGL1-201ENST00000310260 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
VANGL1-201ENST00000310260 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
VANGL1-201ENST00000310260 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
VANGL1-201ENST00000310260 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
VANGL1-201ENST00000310260 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
VANGL1-201ENST00000310260 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
VANGL1-201ENST00000310260 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
VANGL1-201ENST00000310260 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms