RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 MIR22HGQ0VDD5 57 aa3.56□□□□□ -1.84
PDE4D-201ENST00000309641 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
PDE4D-201ENST00000309641 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
PDE4D-201ENST00000309641 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
PDE4D-201ENST00000309641 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
PDE4D-201ENST00000309641 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
PDE4D-201ENST00000309641 A6NED7 52 aa3.49□□□□□ -1.85
PDE4D-201ENST00000309641 ROMO1P60602 79 aa3.48□□□□□ -1.85
PDE4D-201ENST00000309641 K7ERS5 55 aa3.46□□□□□ -1.86
PDE4D-201ENST00000309641 NEBP20929 6669 aa3.44□□□□□ -1.86
PDE4D-201ENST00000309641 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
PDE4D-201ENST00000309641 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
PDE4D-201ENST00000309641 TNP1P09430 55 aa3.43□□□□□ -1.86
PDE4D-201ENST00000309641 SPRR2EP22531 72 aa3.43□□□□□ -1.86
PDE4D-201ENST00000309641 SPRR2BP35325 72 aa3.43□□□□□ -1.86
PDE4D-201ENST00000309641 SPRR2AP35326 72 aa3.43□□□□□ -1.86
PDE4D-201ENST00000309641 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
PDE4D-201ENST00000309641 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
PDE4D-201ENST00000309641 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
PDE4D-201ENST00000309641 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
PDE4D-201ENST00000309641 MT1EP04732 61 aa3.37□□□□□ -1.87
PDE4D-201ENST00000309641 KRTAP25-1Q3LHN0 102 aa3.31□□□□□ -1.88
PDE4D-201ENST00000309641 SPRR2DP22532 72 aa3.3□□□□□ -1.88
PDE4D-201ENST00000309641 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
PDE4D-201ENST00000309641 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
PDE4D-201ENST00000309641 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
PDE4D-201ENST00000309641 MT1LQ93083 61 aa3.26□□□□□ -1.89
PDE4D-201ENST00000309641 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
PDE4D-201ENST00000309641 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
PDE4D-201ENST00000309641 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
PDE4D-201ENST00000309641 MT1GP13640 62 aa3.22□□□□□ -1.89
PDE4D-201ENST00000309641 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
PDE4D-201ENST00000309641 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
PDE4D-201ENST00000309641 MT1MQ8N339 61 aa3.19□□□□□ -1.9
PDE4D-201ENST00000309641 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
PDE4D-201ENST00000309641 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
PDE4D-201ENST00000309641 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
PDE4D-201ENST00000309641 PP632Q6XCG6 107 aa3.15□□□□□ -1.9
PDE4D-201ENST00000309641 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
PDE4D-201ENST00000309641 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
PDE4D-201ENST00000309641 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
PDE4D-201ENST00000309641 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
PDE4D-201ENST00000309641 MT4P47944 62 aa2.9□□□□□ -1.94
PDE4D-201ENST00000309641 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
PDE4D-201ENST00000309641 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
PDE4D-201ENST00000309641 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
PDE4D-201ENST00000309641 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
PDE4D-201ENST00000309641 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
PDE4D-201ENST00000309641 INE1O15225 51 aa2.75□□□□□ -1.97
PDE4D-201ENST00000309641 MT1AP04731 61 aa2.75□□□□□ -1.97
PDE4D-201ENST00000309641 KRTAP12-4P60329 112 aa2.75□□□□□ -1.97
PDE4D-201ENST00000309641 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
PDE4D-201ENST00000309641 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
PDE4D-201ENST00000309641 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
PDE4D-201ENST00000309641 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
PDE4D-201ENST00000309641 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
PDE4D-201ENST00000309641 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
PDE4D-201ENST00000309641 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -1.99
PDE4D-201ENST00000309641 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
PDE4D-201ENST00000309641 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
PDE4D-201ENST00000309641 MT3P25713 68 aa2.49□□□□□ -2.01
PDE4D-201ENST00000309641 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
PDE4D-201ENST00000309641 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
PDE4D-201ENST00000309641 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
PDE4D-201ENST00000309641 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
PDE4D-201ENST00000309641 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
PDE4D-201ENST00000309641 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
PDE4D-201ENST00000309641 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
PDE4D-201ENST00000309641 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
PDE4D-201ENST00000309641 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
PDE4D-201ENST00000309641 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.07
PDE4D-201ENST00000309641 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
PDE4D-201ENST00000309641 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
PDE4D-201ENST00000309641 PRM1P04553 51 aa1.71□□□□□ -2.14
PDE4D-201ENST00000309641 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
PDE4D-201ENST00000309641 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
PDE4D-201ENST00000309641 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
PDE4D-201ENST00000309641 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 10.3 ms