RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
APTX-201ENST00000309615 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
APTX-201ENST00000309615 SPRR2EP22531 72 aa4.81□□□□□ -1.64
APTX-201ENST00000309615 SPRR2BP35325 72 aa4.81□□□□□ -1.64
APTX-201ENST00000309615 SPRR2AP35326 72 aa4.81□□□□□ -1.64
APTX-201ENST00000309615 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
APTX-201ENST00000309615 NEBP20929 6669 aa4.79□□□□□ -1.64
APTX-201ENST00000309615 KRTAP19-5Q3LI72 72 aa4.79□□□□□ -1.64
APTX-201ENST00000309615 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
APTX-201ENST00000309615 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
APTX-201ENST00000309615 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
APTX-201ENST00000309615 MT1EP04732 61 aa4.77□□□□□ -1.65
APTX-201ENST00000309615 ROMO1P60602 79 aa4.77□□□□□ -1.65
APTX-201ENST00000309615 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
APTX-201ENST00000309615 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
APTX-201ENST00000309615 KRTAP12-3P60328 96 aa4.65□□□□□ -1.66
APTX-201ENST00000309615 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.66
APTX-201ENST00000309615 SPRR2DP22532 72 aa4.64□□□□□ -1.67
APTX-201ENST00000309615 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
APTX-201ENST00000309615 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
APTX-201ENST00000309615 MT1LQ93083 61 aa4.61□□□□□ -1.67
APTX-201ENST00000309615 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
APTX-201ENST00000309615 MT1GP13640 62 aa4.57□□□□□ -1.68
APTX-201ENST00000309615 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
APTX-201ENST00000309615 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
APTX-201ENST00000309615 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
APTX-201ENST00000309615 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
APTX-201ENST00000309615 MT1MQ8N339 61 aa4.51□□□□□ -1.69
APTX-201ENST00000309615 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
APTX-201ENST00000309615 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
APTX-201ENST00000309615 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
APTX-201ENST00000309615 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
APTX-201ENST00000309615 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.71
APTX-201ENST00000309615 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
APTX-201ENST00000309615 LUZP6Q538Z0 58 aa4.26□□□□□ -1.73
APTX-201ENST00000309615 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
APTX-201ENST00000309615 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
APTX-201ENST00000309615 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
APTX-201ENST00000309615 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
APTX-201ENST00000309615 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
APTX-201ENST00000309615 MT4P47944 62 aa4.05□□□□□ -1.76
APTX-201ENST00000309615 MT1AP04731 61 aa3.91□□□□□ -1.78
APTX-201ENST00000309615 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.78
APTX-201ENST00000309615 KRTAP12-4P60329 112 aa3.9□□□□□ -1.78
APTX-201ENST00000309615 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
APTX-201ENST00000309615 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
APTX-201ENST00000309615 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
APTX-201ENST00000309615 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
APTX-201ENST00000309615 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
APTX-201ENST00000309615 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
APTX-201ENST00000309615 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
APTX-201ENST00000309615 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.83
APTX-201ENST00000309615 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
APTX-201ENST00000309615 MT3P25713 68 aa3.56□□□□□ -1.84
APTX-201ENST00000309615 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
APTX-201ENST00000309615 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
APTX-201ENST00000309615 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
APTX-201ENST00000309615 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
APTX-201ENST00000309615 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
APTX-201ENST00000309615 INE1O15225 51 aa3.25□□□□□ -1.89
APTX-201ENST00000309615 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
APTX-201ENST00000309615 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
APTX-201ENST00000309615 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
APTX-201ENST00000309615 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
APTX-201ENST00000309615 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
APTX-201ENST00000309615 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
APTX-201ENST00000309615 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
APTX-201ENST00000309615 LCE1CQ5T751 118 aa2.96□□□□□ -1.93
APTX-201ENST00000309615 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
APTX-201ENST00000309615 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
APTX-201ENST00000309615 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
APTX-201ENST00000309615 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
APTX-201ENST00000309615 PRM1P04553 51 aa2.48□□□□□ -2.01
APTX-201ENST00000309615 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
APTX-201ENST00000309615 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
APTX-201ENST00000309615 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
APTX-201ENST00000309615 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms