RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
HMGCLL1-202ENST00000308161 ATP5EP56381 51 aaPredicted RBP6.19□□□□□ -1.42
HMGCLL1-202ENST00000308161 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
HMGCLL1-202ENST00000308161 TNP1P09430 55 aa6.13□□□□□ -1.43
HMGCLL1-202ENST00000308161 MT1GP13640 62 aa6.13□□□□□ -1.43
HMGCLL1-202ENST00000308161 C10orf95Q9H7T3 257 aa6.13□□□□□ -1.43
HMGCLL1-202ENST00000308161 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
HMGCLL1-202ENST00000308161 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
HMGCLL1-202ENST00000308161 LINC01558Q9Y6Z2 57 aa6.09□□□□□ -1.43
HMGCLL1-202ENST00000308161 MT1LQ93083 61 aa6.05□□□□□ -1.44
HMGCLL1-202ENST00000308161 MT1MQ8N339 61 aa6.04□□□□□ -1.44
HMGCLL1-202ENST00000308161 TMEM258P61165 79 aa6.01□□□□□ -1.45
HMGCLL1-202ENST00000308161 GPR98Q8WXG9 6306 aa5.99□□□□□ -1.45
HMGCLL1-202ENST00000308161 UQCR11O14957 56 aa5.98□□□□□ -1.45
HMGCLL1-202ENST00000308161 KRTAP4-3Q9BYR4 195 aa5.95□□□□□ -1.46
HMGCLL1-202ENST00000308161 MT4P47944 62 aa5.88□□□□□ -1.47
HMGCLL1-202ENST00000308161 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
HMGCLL1-202ENST00000308161 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
HMGCLL1-202ENST00000308161 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
HMGCLL1-202ENST00000308161 K7ERS5 55 aa5.76□□□□□ -1.49
HMGCLL1-202ENST00000308161 PSPHP1O15172 72 aa5.75□□□□□ -1.49
HMGCLL1-202ENST00000308161 PCP4P48539 62 aa5.75□□□□□ -1.49
HMGCLL1-202ENST00000308161 KRTAP25-1Q3LHN0 102 aa5.74□□□□□ -1.49
HMGCLL1-202ENST00000308161 KRTAP5-4Q6L8H1 288 aa5.73□□□□□ -1.49
HMGCLL1-202ENST00000308161 V9GYY9 64 aa5.71□□□□□ -1.5
HMGCLL1-202ENST00000308161 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
HMGCLL1-202ENST00000308161 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
HMGCLL1-202ENST00000308161 Q1T7F1 81 aa5.64□□□□□ -1.51
HMGCLL1-202ENST00000308161 A6NED7 52 aa5.56□□□□□ -1.52
HMGCLL1-202ENST00000308161 KRTAP5-5Q701N2 237 aaPredicted RBP5.5□□□□□ -1.53
HMGCLL1-202ENST00000308161 KRTAP5-10Q6L8G5 202 aa5.47□□□□□ -1.53
HMGCLL1-202ENST00000308161 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
HMGCLL1-202ENST00000308161 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
HMGCLL1-202ENST00000308161 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
HMGCLL1-202ENST00000308161 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
HMGCLL1-202ENST00000308161 A0A0A0MQY5 61 aa5.42□□□□□ -1.54
HMGCLL1-202ENST00000308161 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
HMGCLL1-202ENST00000308161 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
HMGCLL1-202ENST00000308161 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
HMGCLL1-202ENST00000308161 ROMO1P60602 79 aa5.35□□□□□ -1.55
HMGCLL1-202ENST00000308161 RPS28P62857 69 aaKnown RBP5.28□□□□□ -1.56
HMGCLL1-202ENST00000308161 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
HMGCLL1-202ENST00000308161 MT1AP04731 61 aa5.15□□□□□ -1.59
HMGCLL1-202ENST00000308161 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
HMGCLL1-202ENST00000308161 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
HMGCLL1-202ENST00000308161 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
HMGCLL1-202ENST00000308161 KRTAP6-2Q3LI66 62 aa4.93□□□□□ -1.62
HMGCLL1-202ENST00000308161 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.63
HMGCLL1-202ENST00000308161 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
HMGCLL1-202ENST00000308161 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
HMGCLL1-202ENST00000308161 MT3P25713 68 aa4.72□□□□□ -1.65
HMGCLL1-202ENST00000308161 AHNAKQ09666 5890 aaKnown RBP4.64□□□□□ -1.67
HMGCLL1-202ENST00000308161 MUC5BQ9HC84 5762 aaPredicted RBP4.62□□□□□ -1.67
HMGCLL1-202ENST00000308161 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
HMGCLL1-202ENST00000308161 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
HMGCLL1-202ENST00000308161 PRAC1Q96KF2 57 aa4.46□□□□□ -1.69
HMGCLL1-202ENST00000308161 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
HMGCLL1-202ENST00000308161 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
HMGCLL1-202ENST00000308161 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
HMGCLL1-202ENST00000308161 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
HMGCLL1-202ENST00000308161 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
HMGCLL1-202ENST00000308161 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
HMGCLL1-202ENST00000308161 LCE1BQ5T7P3 118 aa4.15□□□□□ -1.75
HMGCLL1-202ENST00000308161 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
HMGCLL1-202ENST00000308161 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
HMGCLL1-202ENST00000308161 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
HMGCLL1-202ENST00000308161 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
HMGCLL1-202ENST00000308161 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
HMGCLL1-202ENST00000308161 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
HMGCLL1-202ENST00000308161 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
HMGCLL1-202ENST00000308161 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
HMGCLL1-202ENST00000308161 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
HMGCLL1-202ENST00000308161 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
HMGCLL1-202ENST00000308161 PRM1P04553 51 aa2.76□□□□□ -1.97
HMGCLL1-202ENST00000308161 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
HMGCLL1-202ENST00000308161 INE1O15225 51 aa2.37□□□□□ -2.03
HMGCLL1-202ENST00000308161 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 93.2 ms